KEGG   Alteromonas macleodii Deep ecotype: MADE_1000280Help
Entry
MADE_1000280      CDS       T00747                                 

Definition
5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
amc  Alteromonas macleodii Deep ecotype
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:amc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    MADE_1000280
Enzymes [BR:amc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     MADE_1000280
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     MADE_1000280
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
61788..62597
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRLGVSPHLIGNTITRVVVRERRMRWPIPQEVAKVEGQKVTAVKRRAKYLL
IETAQGTLILHLGMSGKLRVIDASTPVIKHDHVDIVLSTGKCLRFNDPRRFGAVLYQAPD
THIPMLDNLGPEPLTDDFDDTRLFTLSRNRKGPVKNFIMDNAIVVGVGNIYANEALFLAG
IDPRRAAGNISAARYKSLTATIKQVLAKAIEQGGTTLKDFAQTDGKPGYFAQHLNVYGRK
GEPCEACGKAIESKVIGQRNTFFCTRCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacccgaagttgaagtaagccgtttgggcgtctcaccacatcttattggc
aacacgattacccgtgttgtggttcgcgagcgaagaatgcgttggcctattccacaagag
gtggccaaggttgaggggcaaaaggtcacggccgtaaagcgccgcgctaaatatctattg
attgagacagcgcagggtacgctaattttacacttgggcatgtcgggtaaactacgggtt
atcgacgcttctaccccagtgattaagcacgaccatgtggacattgtgcttagcacgggt
aaatgtctgcgctttaacgaccctagacgcttcggtgccgtgctgtatcaagcgccagat
acacacattcccatgcttgataatcttgggcctgagccccttacagacgattttgacgat
acgcgcttatttaccctgtcacgcaaccgcaaaggcccagtgaaaaacttcattatggat
aatgctattgtggtgggggttggaaatatctatgcaaacgaagcgctatttttagcgggt
atcgatccaaggcgtgccgccggtaatatcagtgcagcccgctacaagtcgttaaccgct
acaataaagcaagtgttggcaaaagccattgaacagggcggcactacgttaaaagatttt
gcgcaaacagatggcaagcctggctatttcgcccaacaccttaatgtctatggccgaaaa
ggagagccatgcgaggcgtgtggtaaggcgatagaaagcaaagtaatcgggcagcgcaat
accttcttttgtactcgctgccaacgttaa

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