KEGG   Alteromonas mediterranea DE: MADE_1004665
Entry
MADE_1004665      CDS       T00747                                 
Name
(GenBank) RNA helicase
  KO
K05590  ATP-dependent RNA helicase SrmB [EC:3.6.4.13]
Organism
amc  Alteromonas mediterranea DE
Brite
KEGG Orthology (KO) [BR:amc00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amc03009]
    MADE_1004665
Enzymes [BR:amc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     MADE_1004665
Ribosome biogenesis [BR:amc03009]
 Prokaryotic type
  rRNA helicases
   MADE_1004665
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 UTP25 AAA_22 ERCC3_RAD25_C
Other DBs
NCBI-ProteinID: AEA97079
UniProt: F2GBS8
Position
complement(1004324..1005550)
AA seq 408 aa
MTFEELELDDALCHAAADMGFEAPTNIQELVIPHALDGRDILASAPTGTGKTAAFLLPAC
QFLLDYPRKQPGATRILILTPTRELALQVYEQAVAITKHTQLVCGVITGGINYGTDKETL
SKNLDILVATPGRLLEHIEKEAADCRDIECLILDEADRMLDMGFSTVVNQIAAEARWRKQ
NLLFSATLEGKGVKTFAHDILNNPEIVEANPSRKEKNKIHQWYHLADDMNHKQALLVNIL
KQETTTSAVVFVKTRDRLQMLKDFLASQDIQVCWLQGEMPQDKRNAAMARFKNGEVPILL
ATDVAARGIDVPNVSHVINFDMPRKADIYVHRIGRTGRAGAKGTAISLVEAHDFEMVTKA
ARYMGEPLKARVIDELRPKNKTPKIGPKKKKVKAKDKTKAKAKPKKKK
NT seq 1227 nt   +upstreamnt  +downstreamnt
atgactttcgaagaactcgaattagacgatgcgctgtgtcacgcagcagcagatatgggg
tttgaagctccaactaacattcaagaattggtgatcccacacgcgctagacggccgagat
attttagcgtctgcgccaactggtacaggtaaaaccgctgcattcttattgccagcctgt
cagtttttactcgactacccgcgcaaacagccgggtgcgacacgtattttgatcttaacg
ccaacccgcgaactggctttgcaggtttacgagcaagcggttgccattaccaagcacacc
cagcttgtgtgtggagtaattactggcggtattaactacggcacagataaagagacgctt
agcaagaacttagatattcttgtcgccacaccaggccgtcttcttgaacacattgaaaaa
gaagcggcagactgtcgcgatattgaatgtttaattcttgatgaagccgaccgtatgctg
gatatgggcttctcgactgtggtgaaccaaattgcggcggaagcgcgctggcgcaagcag
aacctgctgttctcggccacccttgaaggtaaaggtgttaagaccttcgctcacgacatt
cttaataaccctgaaattgttgaagcaaacccgtcacgcaaagagaagaataaaattcac
cagtggtatcaccttgctgatgacatgaaccacaagcaagctcttctggtgaacatattg
aagcaggaaactacaacatcggcggtggtatttgtaaaaacccgcgaccgcctgcaaatg
ctaaaagactttctagcttcacaagatattcaggtgtgctggttacaaggtgaaatgccg
caggacaaacgcaacgccgctatggcccgctttaaaaatggcgaagtccctattttgtta
gcgactgatgtagctgcccgtggcattgacgtgccaaacgtcagtcatgttattaacttt
gatatgccgcgcaaagccgatatttacgttcaccgtattggtagaaccggccgcgcaggc
gctaaaggcacggctatttcactggttgaagcacacgactttgaaatggtaaccaaagca
gcgcgttacatgggcgagcctttaaaagcccgtgttatcgacgagctacgccctaaaaac
aaaacgcctaaaattggcccgaaaaagaaaaaagtgaaggccaaagataaaactaaggcg
aaagccaagcctaagaagaaaaagtaa

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