KEGG   Amycolatopsis mediterranei U32: AMED_4275
Entry
AMED_4275         CDS       T01269                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
amd00521  Streptomycin biosynthesis
amd00523  Polyketide sugar unit biosynthesis
amd00525  Acarbose and validamycin biosynthesis
amd00541  O-Antigen nucleotide sugar biosynthesis
amd01055  Biosynthesis of vancomycin group antibiotics
amd01100  Metabolic pathways
amd01110  Biosynthesis of secondary metabolites
amd01250  Biosynthesis of nucleotide sugars
Module
amd_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:amd00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    AMED_4275 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    AMED_4275 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    AMED_4275 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    AMED_4275 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    AMED_4275 (rfbB)
Enzymes [BR:amd01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     AMED_4275 (rfbB)
SSDB
Motif
Pfam: Epimerase GDP_Man_Dehyd 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 NAD_binding_10 adh_short GDH_HM2
Other DBs
NCBI-ProteinID: ADJ46049
UniProt: A0A0H3D921
Position
complement(4676781..4677731)
AA seq 316 aa
MTRRFGRAVVTGGAGFVGAHLCELLLEEDIEVIAVDNLATSSADSLDHLRRYAGFRFVRH
DVTQPMPPSCEADVVFHLASAASPRDYLALPLETLRAGSHGTENALELARRARARFVLAS
TSEVYGDPLEHPQQEGYWGNVNPIGPRSVYDEAKRYAEALTSAYRREFGVDTAIARIFNT
YGPGMRAHDGRMIPAFLDQALKNEPITVTGTGEQTRSICYVEDTARGLLALARADHPGPV
NIGNPEELTVRQVAERIKHLTGSRSPIEYIDAVVDDPQRRCPDISLARDVLGWEPKVDSE
DGLRRTAAWFRRAPSH
NT seq 951 nt   +upstreamnt  +downstreamnt
gtgaccaggcggttcgggcgtgcggtggtgaccgggggtgccggcttcgtcggcgcgcac
ctgtgcgagctgctgctcgaagaggacatcgaagtcatcgccgtcgacaacctcgcgacg
tcctcggcggacagcctggaccacctgcgccgctacgcggggttccggttcgtgcgccac
gacgtcacgcagccgatgccgccgagctgcgaagccgacgtcgtcttccacctcgcttcg
gcagcgtcgccccgcgactacctggccctgcccctggaaaccctgcgcgcgggctcgcac
ggtaccgagaacgcgctcgagctggcccgccgcgctcgtgcccggttcgtgctcgcctcg
accagcgaggtctacggcgatcccctggaacacccgcagcaggaggggtactggggcaac
gtcaacccgatcgggccgcgcagcgtctacgacgaagccaagcgctacgccgaagcgctg
acgtcggcctaccgccgcgaattcggcgtcgacacggcgatcgcgcggatcttcaacacc
tacggccccggcatgcgcgcccacgacggccggatgatcccggccttcctcgaccaggcg
ctcaagaacgagcccatcacggtcaccggcaccggcgagcagacccgctcgatctgctac
gtcgaggacaccgcccgcggcctgctggccctcgcccgggcggaccacccggggccggtc
aacatcggcaacccggaggaactgaccgttcgccaagtggccgagcgcatcaagcacctc
accgggtcccgctcgccgatcgagtacatcgacgccgtcgtcgacgacccgcagcggcgg
tgtcccgacatctccctcgcgcgtgacgtcctcggctgggaaccgaaggtcgactccgaa
gacggtctccgtcgcactgcggcgtggttccgccgggctccgtcacactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (30)   

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