KEGG   Amycolatopsis mediterranei U32: AMED_4489Help
Entry
AMED_4489         CDS       T01269                                 
Gene name
lig
Definition
ATP-dependent DNA ligase
Orthology
K01971  
DNA ligase (ATP) [EC:6.5.1.1]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
Base excision repair
Nucleotide excision repair
Mismatch repair
Non-homologous end-joining
Class
Genetic Information Processing; Replication and repair; Base excision repair [PATH:amd03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:amd03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:amd03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:amd03450]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4927624..4927995
Genome map
AA seq 123 aa AA seqDB search
MVNAVNDRRPAFVLHEHFRPRHHFDLRLEEDGVLRSWAVPRGLPPDPGADRLAVAVPDHA
LDHLDYEDETKKIADTGWWEEHDRTAKRILFTLHGRVGSVRYALIRTARDWLLHRTRDQP
GDT
NT seq 372 nt NT seq  +upstreamnt  +downstreamnt
atggtgaacgccgtgaacgatcggcgaccggcgttcgtgctgcacgagcactttcggcca
cggcaccacttcgacctgcggctggaggaggacggcgtgctgcgctcatgggcggtcccg
cgcggcctcccgccggatcccggcgccgaccgcctcgccgtcgccgtgcccgaccacgct
ctcgaccacctcgactacgaggacgagacgaagaagatcgccgacacgggctggtgggag
gagcacgaccggacggccaagcgcatcctgttcaccctgcacggccgggtgggctcggtg
cggtacgccctgatccgcaccgcccgcgactggctcctgcaccgcacccgcgatcagccg
ggcgacacctga
DBGET integrated database retrieval system