KEGG T01269: AMED

Amycolatopsis mediterranei U32: AMED_5117

Entry

AMED_5117 CDS T01269

Gene name

selA

Definition

selenocysteine synthase

Orthology

K01042

L-seryl-tRNA(Ser) seleniumtransferase [EC:2.9.1.1]

Organism

amd Amycolatopsis mediterranei U32

Pathway

amd00450	Selenocompound metabolism
amd00970	Aminoacyl-tRNA biosynthesis

Class

Metabolism; Metabolism of other amino acids; Selenocompound metabolism [PATH:amd00450]
Genetic Information Processing; Translation; Aminoacyl-tRNA biosynthesis [PATH:amd00970]

SSDB

Motif

Pfam:

SelA Se-cys_synth_N

Other DBs

NCBI-GI:

300786993

NCBI-GeneID:

9439295

UniProt:

D8I1F1

Position

complement(5677612..5678895)

AA seq 427 aa
MPDPRRAIPRTDAVLAEPRIAKAAGSLGRDLVKAVVNDVQQAVRAGEIGPGDVVDTVLAR
LPASASSLRPVINATGVVVHTNLGRAPLSAAARDALVAAAGATDVEFDLATGERARRGRG
ALAALRAAVPDAGAVHVVNNNAAALLLCALALAPGREIVVSRGELVEIGDGFRIPDLLES
AGARLREVGTTNRTSVRDYAAAIGPDTGFVLKVHPSNYRVTGFTAEAAMGELAGLGVPLV
ADIGSGLLAPHPLLPDEPDAASALRAGATIVTASGDKLLGGPQAGVLLGDADVVERLRRH
PAARALRVDKLTLAALEATLRGPEPPVRAALDVSVASLRERAEALVKAIEGVDAQVVASV
AAVGGGGAPGVELPSVAVSLPARYAAALRTGEPAVAGRVVKDRCLLDLRTVRLEEDAELR
EAVRRCG

NT seq 1284 nt +upstreamnt +downstreamnt
atgcctgacccgcgccgcgcgatcccgcggaccgacgcggtcctggccgagccccggatc
gccaaggccgccgggtcgctcgggcgggacctggtcaaagcggtggtcaacgacgtccag
caggcggtgcgggcgggggagatcggccccggcgacgtcgtcgacaccgtgctggcccgg
ctcccggcgagcgcctcgtcgctgcggccggtgatcaacgcgaccggcgtcgtcgtgcac
accaacctcggccgcgccccgctgtcggcggccgcgcgcgacgccctcgtcgcggccgct
ggcgccaccgacgtcgaattcgacctcgcgaccggcgagcgggcccggcgcggccgcggc
gccctcgcggcgctgcgagcggccgtgccggacgccggtgcggtgcacgtggtcaacaac
aacgcggccgccctgctgctctgcgcgctcgcgctggcgccgggccgggagatcgtcgtc
agccggggcgaactggtcgagatcggcgacggcttccggatcccggacctgctggaatcg
gccggcgcgcggctgcgcgaggtcgggaccacgaaccggacatcggtccgggactacgcc
gcggcgatcggcccggacaccgggttcgtgctcaaggtgcacccgtcgaactaccgcgtc
accgggttcaccgcggaagcggcgatgggcgagctggccggcctcggcgtgccgctggtc
gccgacatcggctcggggctgctggccccgcacccgctcctgccggacgaaccggacgcg
gcgagcgcgctgcgggcgggcgccacgatcgtcaccgcgagcggggacaagctgctcggc
ggaccgcaggccggcgtgctgctcggcgacgcggacgtcgtcgaacggctgcggcggcac
ccggccgcgcgggccctgcgcgtcgacaagctcaccctcgccgccctcgaagcgacgctg
cgcgggccggaacccccggtgcgggccgcgctcgacgtgtccgtcgcgagcttgcgggaa
cgagccgaagcgctggtcaaggccatcgagggcgtcgatgcccaggtggtcgcgtcggtg
gcggccgtcggcggcgggggagcgccgggcgtcgaactgcccagcgtcgcggtgagcctg
cccgcccggtacgcggccgcgctgcgcacgggcgagcccgccgtggccggccgggtcgtc
aaggaccgctgcctgctcgacctgcggaccgtgcgcctggaagaggacgccgagctgcgg
gaagccgtccgccgatgcgggtga

All links

Pathway (2)   
   KEGG PATHWAY (2)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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