KEGG T01269: AMED

Amycolatopsis mediterranei U32: AMED_5714

Entry

AMED_5714 CDS T01269

Gene name

lacZ

Definition

beta-galactosidase

Orthology

K01190

beta-galactosidase [EC:3.2.1.23]

Organism

amd Amycolatopsis mediterranei U32

Pathway

amd00052	Galactose metabolism
amd00511	Other glycan degradation
amd00600	Sphingolipid metabolism
amd01100	Metabolic pathways

Class

Metabolism; Carbohydrate metabolism; Galactose metabolism [PATH:amd00052]
Metabolism; Lipid metabolism; Sphingolipid metabolism [PATH:amd00600]
Metabolism; Glycan biosynthesis and metabolism; Other glycan degradation [PATH:amd00511]

SSDB

Motif

Pfam:

Glyco_hydro_2_C Bgal_small_N Glyco_hydro_2_N Laminin_G_3 Glyco_hydro_2 Glyco_hydro_42 Glyco_hydro_72

Other DBs

NCBI-GI:

300787576

NCBI-GeneID:

9439883

UniProt:

D8I7P5

Position

6321254..6325165

AA seq 1303 aa
MSQVSPDPAARRAGVSRRRFLEGSAALLGTLALPATLPCPATAATLDGLAAPPNGFPEWN
NNIGIFELGTEPPHATLMPYADLGEALAGDRTRSPYRFDLDGEWKFRHADRPDARDPGFY
RDDVDDRSWARMPVPSNWQLHGYDFPIYVNITYPWWGANGQNENAQPPFAPTRFNPVGQY
RRTFRVPQGWQGRRTFLHFEGVKSAFYVWINGKLIGYREDSYTPSEFDITEHLRPGTNQI
AVEVYRFPDGDWMEDQDMIRLAGIFRSVYLFSTPTVHLRDFRLDTRLRDGYTNADLAVTA
HVRDYGGTDKRTYTVETQLYDADRRPVWPRPLSQQVNLGSAAAGQDVTVSAAQGVRAPKL
WSAERPDLYTAVLVLRDPAGKVAETLSARVGFREFGLVDGLMRINGQPVTLRGTNRHEMH
PEHGAALTRADLVEDIGLMKRLNINAVRTSHYPNNPNWYELADEYGLYVLDETNLETHGV
RDRYPGSNPDWTAAVVARAQRMVHRDKNHPSVVIWSLGNEAGAGSNFVAMRDWIRSYDTT
RVIQYEGDNRPEVSDIRSQMYESPSGIKKRALDTSDTRPYIMIEYAHAMGNSNGNLKEYW
DLIRTYPILQGGFIWDFVDQGLHWPTPPRKQLAETGPEALAAELAPAAKFDRAHGVSGGA
VFASAESLNLTGSLTLEAWVTPAAVGGHQPIVTRGDHQYSLKLSDGNLEFFIYAGGWIAA
TAPVPADWTGKEHHVAGVFDDAANTLTLYLDGKALTTTSTDRTPDSTAAQLALGTDAENP
ARVFGGHIRVAHVYARGLSATELAETTRDPSDPAVRFWFDAATATYTEQQPADRTFLAYG
GDWGDNPNDGNFCANGIVTAERRPGGKATEVKHVYQSINVSAGADVVSGRVTITNENLFT
NVNSYDGSWELMADGKVVQRGQLTRAQLDVPPRSSRTITVPLRRPVRLEPGAEYFLRLSF
TTRTRTAWADRGFEVAKQQVPVDFGSPAVQPVPLAQVPAVVVTDADKAITVTGDGFTVTI
AKDTGLITSYEAHGVRLVTAGPTPNFWRAPTDNDIGNGQPSRNATWRHAGTNRRVTGVTV
KTLAGKAAVVTVSGTLPTSVPSAYTTTYTVFGNAEIKVDNTLHPGASTLPYIPEIGTILL
LPGEFDTIDYYGRGPDENHWDRNTGSDVGWYSSTVAAQWTDYIRPQENGNKTDVRWVALT
NKRGIGLLASGEPLLEANASHFTPEDLSVGARHDYQLTPRRDVVLRLNHKQMGVGGDNSW
GAHTHDEYKLFANRDYSYTYRLRPLTRRDQAMTLTRRPTATSP

NT seq 3912 nt +upstreamnt +downstreamnt
atgtctcaggtctcgccggacccggccgcacgccgggcgggggtcagccgtcgcagattc
ctggagggaagtgccgcactcctgggaacgctcgccctgcccgccacgctcccatgcccg
gccacggcggccacgctcgacggcctcgccgcgccgcccaacggcttccccgagtggaac
aacaacatcgggatcttcgagctcggcaccgaaccaccgcacgccacactcatgccctac
gccgacctgggcgaagcgctggccggcgaccgcacccgttcgccctaccgcttcgacctc
gacggcgaatggaagttccggcacgccgaccggcccgacgcgcgtgatcccggcttctac
cgcgacgacgtcgacgaccgctcctgggccaggatgcccgtgccgtcgaactggcagctg
cacggctacgacttcccgatctacgtcaacatcacctacccctggtggggcgccaacgga
cagaacgagaacgcccagccgcccttcgccccgacgcggttcaacccggtcggccagtac
cggcggaccttccgcgtcccgcaaggctggcagggcaggcgcacgttcctgcacttcgag
ggcgtcaagtcggcgttctacgtgtggatcaacggcaagctgatcggctaccgcgaagac
tcctacaccccgagcgagttcgacatcaccgaacatctccggcccggaaccaaccagatc
gccgtcgaggtctaccgcttccccgacggcgactggatggaagaccaggacatgatccgc
ctcgccggcatcttccggtccgtctacctgttctcgacaccgacggtgcacctgcgcgac
ttccgcctcgacacgcggctgcgcgacggctacacgaacgccgacctcgccgtcaccgcc
cacgtccgcgactacggcgggacggacaagcgcacctacaccgtggagacccagctctac
gacgcggaccggcgcccggtctggccgcggcctctgagccagcaggtgaacctcggctcg
gccgccgccgggcaggacgtcacggtgagcgcggcccaaggcgtacgcgcgccgaaactc
tggtcggcggagcggcccgacctctacacggcggtgctcgtgctgcgcgacccggccggg
aaggtcgccgagaccctctcggcacgcgtcggcttccgcgaattcgggcttgtcgacggg
ctgatgcgcatcaacgggcagccggtgacgctgcgcggcaccaaccgccacgagatgcac
cccgagcacggcgccgccctcacccgcgccgacctcgtcgaggacatcgggctgatgaag
cgcctcaacatcaacgccgtccgcacctcccactaccccaacaaccccaactggtacgag
ctggccgacgagtacggcctgtacgtcctggacgaaaccaacctggagacgcacggtgtc
cgggaccgctaccccggttcgaacccggactggaccgccgcggtcgtcgcccgtgcccag
cggatggtgcaccgcgacaagaaccacccgtccgtggtcatctggtcgctgggcaacgaa
gccggcgcgggcagcaacttcgtcgccatgcgcgactggatccgctcctacgacacgaca
cgggtgatccagtacgagggcgacaaccggcccgaggtcagcgacatccgctcgcagatg
tacgaaagcccctcgggaatcaagaaacgcgcgctcgatacgtccgacacccggccgtac
atcatgatcgagtacgcccacgcgatgggaaactccaacggcaacctcaaggagtactgg
gacctcatccgcacgtacccgatcctgcagggcgggttcatctgggacttcgtcgaccag
gggctgcactggcccaccccaccgcgcaagcagctcgccgagaccgggcccgaagccctg
gccgccgagctcgcgcccgccgcgaagttcgaccgggcgcacggcgtctcgggcggtgcg
gtcttcgcctccgcggaaagcctgaacctgaccggttcgctgacgctggaggcctgggtc
accccggccgcggtcggcgggcaccagccgatcgtcaccagaggcgaccaccagtactcg
ctcaaactgtccgacggcaacctcgagttcttcatctacgccggcggctggatcgcggcc
accgcaccggtgcccgcggactggacggggaaggagcaccacgtggccggtgtcttcgac
gacgcggcgaacacgctcacgctctacctcgacggcaaggccctgaccaccaccagcacc
gaccgcacgccggacagcaccgcggcgcagctcgcgctcggcaccgatgccgagaatccc
gcgcgcgtgttcggcgggcacatccgcgtcgcccacgtgtacgcgcgagggctcagcgcc
accgaactcgcggagacgacccgcgacccgagtgatcctgccgtccggttctggttcgac
gcggccaccgcgacctacaccgaacagcaacccgccgaccggacctttctcgcctacggc
ggcgactggggcgacaaccccaacgacgggaacttctgcgccaacggcatcgtcaccgcc
gaacgccggccgggcgggaaggccaccgaggtcaagcacgtctaccagtcgatcaacgtc
tccgcaggcgccgacgtcgtctcgggccgggtgacgatcacgaacgagaacctcttcacc
aacgtcaactcctacgacggcagctgggaactcatggccgacggcaaagtcgtccagcgc
gggcagctcacccgcgcccagctcgacgtgccaccccggtcgagcaggacgatcacggtg
ccgctccgccggccggtccgcctcgagccgggagccgagtacttccttcgcctgtccttc
accacccggacgcgcacggcctgggccgaccgcggcttcgaagtggccaaacagcaggtg
ccggtcgacttcggcagccccgcggtgcagccggtgccactcgcgcaggtgccggccgtg
gtcgtcacagacgccgacaaggccatcacggtcaccggcgacgggttcacggtgaccatc
gccaaggacaccggtctgatcacctcctacgaggcccacggcgtgcggctcgtgacggcg
gggccgaccccgaacttctggcgtgcacccaccgacaacgacatcgggaacggacagccg
agccgcaacgcgacctggcgccacgcgggcaccaaccgccgagtcaccggcgtcaccgtg
aaaaccctcgccggcaaggccgccgtcgtgaccgtcagcggcaccctgccgacgtcggtc
ccctcggcatacaccaccacgtacacggtcttcggcaacgccgagatcaaagtggacaac
acgctccaccccggtgcatcgaccctgccctacattcccgagatcggaacgatcctgctc
cttcccggggagttcgacaccatcgactactacggccggggacccgacgagaaccactgg
gaccgcaacacgggctccgacgtgggctggtactcctcgacggtggccgcgcagtggacc
gattacatccgtccccaggaaaacggcaacaagaccgacgtacgctgggtcgcgctgacc
aacaagcgtggtatcgggctcctcgcgagcggcgagccgctgctggaggccaacgcgtca
cacttcacgccggaggacctgtcggtcggcgcgcggcacgactaccagctcaccccccgc
cgggacgtggtactgcgcctcaaccacaagcagatgggcgtcggcggcgacaacagctgg
ggcgcgcacacccacgacgaatataaactgttcgccaaccgcgactacagctacacctac
cggctacgccccctcaccaggcgagaccaggccatgacactcacccgccgccccacggca
acctcgccgtag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (11)   
   KEGG COMPOUND (11)   
Chemical reaction (6)   
   KEGG ENZYME (1)   
   KEGG REACTION (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (35)   

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