KEGG   Amycolatopsis mediterranei U32: AMED_7893Help
Entry
AMED_7893         CDS       T01269                                 

Gene name
fadB
Definition
3-hydroxyacyl-CoA dehydrogenase
Orthology
K01782  
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3]
Organism
amd  Amycolatopsis mediterranei U32
Pathway
Fatty acid degradation
Valine, leucine and isoleucine degradation
Geraniol degradation
Lysine degradation
Tryptophan metabolism
beta-Alanine metabolism
Propanoate metabolism
Butanoate metabolism
Limonene and pinene degradation
Caprolactam degradation
Biosynthesis of unsaturated fatty acids
Metabolic pathways
Biosynthesis of secondary metabolites
Microbial metabolism in diverse environments
Carbon metabolism
Fatty acid metabolism
Module
beta-Oxidation
Class
Metabolism; Overview; Carbon metabolism [PATH:amd01200]
Metabolism; Overview; Fatty acid metabolism [PATH:amd01212]
Metabolism; Carbohydrate metabolism; Propanoate metabolism [PATH:amd00640]
Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:amd00650]
Metabolism; Lipid metabolism; Fatty acid degradation [PATH:amd00071]
Metabolism; Lipid metabolism; Biosynthesis of unsaturated fatty acids [PATH:amd01040]
Metabolism; Amino acid metabolism; Valine, leucine and isoleucine degradation [PATH:amd00280]
Metabolism; Amino acid metabolism; Lysine degradation [PATH:amd00310]
Metabolism; Amino acid metabolism; Tryptophan metabolism [PATH:amd00380]
Metabolism; Metabolism of other amino acids; beta-Alanine metabolism [PATH:amd00410]
Metabolism; Metabolism of terpenoids and polyketides; Limonene and pinene degradation [PATH:amd00903]
Metabolism; Metabolism of terpenoids and polyketides; Geraniol degradation [PATH:amd00281]
Metabolism; Xenobiotics biodegradation and metabolism; Caprolactam degradation [PATH:amd00930]
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(8683908..8686079)
Genome map
AA seq 723 aa AA seqDB search
MAESKTIRWDQDSDGIVTLTLDDPNQSANTMNAAFRESLGVTVDRLEAEKDSITGVVITS
AKKTFFAGGDLNDLIQAKPEHAAELTEGSSLMKGQMRRIEQLGKPVVAAINGAALGGGLE
IALATHHRIAADVKGSQIGLPEVTLGLLPGGGGVVRTVRLLGIQSALLNVLLQGQRHRPA
KALELGLVHELVGSVEELVPAAKAWIKANPEGGVQPWDVKGYKIPGGTPSNPSFAANLPA
FPANLRKQIKGANMPAPRAILAAAIEGAQVDVDTALQIETRYFIHLATGQVSKNMTKAFF
FDLQTINSGGSRPDGFEKYTAKKVGVLGAGMMGAAIAYVSAKAGIDVVLKDVSLEAAEKG
KSYAVKLEEKALSRGKTTQEKSDALLAKIKPTGDPADFAGVDFVIEAVFESVELKHKVFG
EIESVVNADAVLGSNTSTLPITTLAEGVQRTEDFIGIHFFSPVDKMPLVEIICGEKTSPA
TLAKVFDYTLQIKKTPIVVNDSRGFFTSRVIGTFINEAVAALGEGVEPASIEQAGAQAGY
PAPPLQLMDELTLTLPRKIRKETREAVEAAGGTWKAHASESVIDRMVEEFDRKGRSTGAG
FYEYDENGKRTGLWPGLRDAFKSGSAEVPFEDLKERMLFAEALETVKCFDEGVLTSVADA
NIGSIFGIGFPAWTGGVIQYINQYEGGLQGFVDRSRELAARYGDHFEPPASLVEKAAKGE
IYE
NT seq 2172 nt NT seq  +upstreamnt  +downstreamnt
atggccgagagcaagaccatccgctgggaccaggactccgacggcatcgtcaccctgacc
ctggacgacccgaaccagtcggcgaacacgatgaacgccgccttccgcgagtcgctgggc
gtcaccgtcgaccgcctggaggccgagaaggactccatcaccggcgtcgtcatcacgtcc
gccaagaagacgttcttcgccggcggcgacctgaacgacctgatccaggcgaagcccgag
cacgcggccgagctgaccgagggcagctccctgatgaaggggcagatgcgccggatcgag
cagctcggcaagccggtcgtcgcggcgatcaacggcgccgcgctcggcggtggcctggag
atcgcgctggcgacgcaccaccgcatcgccgccgacgtcaagggcagccagatcggcttg
cccgaggtgacgctgggcctgctgcccggcggcggtggcgtggtccgcaccgtgcggctg
ctcggcatccagagcgcgctgctgaacgtcctgctgcagggccagcggcaccgcccggcc
aaggcgctcgagctcggcctggtgcacgaactcgtcggttcggttgaagagctcgttccc
gccgcgaaggcgtggatcaaggcgaaccccgagggcggcgtgcagccgtgggacgtcaag
ggctacaagatccccggcggcaccccgtcgaacccgagcttcgcggccaacctgccggcg
ttcccggcgaacctgcgcaagcagatcaagggcgcgaacatgccggcgccgcgggcgatc
ctggccgccgcgatcgagggcgcgcaggtcgacgtcgacaccgcgctccagatcgagacg
cgctacttcatccacctcgccaccggccaggtctcgaagaacatgacgaaggcgttcttc
ttcgacctgcagaccatcaactccggcggctcgcggcccgacggcttcgagaagtacacc
gcgaagaaggtgggtgtgctcggcgccgggatgatgggtgccgcgatcgcgtacgtgtcg
gcgaaggccggtatcgacgtcgtcctcaaggacgtctcgctcgaggcggccgaaaagggc
aagagctacgcggtcaagctcgaggagaaggccctctcgcgcggcaagaccacgcaggag
aagtcggacgcactgctggcgaagatcaagccgaccggtgacccggccgacttcgcgggc
gtcgacttcgtcatcgaggccgtcttcgagagcgtcgagctgaagcacaaggtgttcggc
gagatcgaaagcgtcgtcaacgccgacgcggtgctgggttccaacacctcgaccctgccg
atcaccacgctcgccgagggcgtgcagcggaccgaggacttcatcgggatccacttcttc
tcgccggtggacaagatgccgctggtcgagatcatctgcggtgagaagacgtcgccggcc
acgctggccaaggtcttcgactacacgctgcagatcaagaagaccccgatcgtcgtcaac
gacagccgcggcttcttcacctcgcgggtgatcggcacgttcatcaacgaggccgtcgcc
gcgctgggcgagggtgtcgagccggcgtcgatcgagcaggcgggtgcgcaggcgggctac
ccggcgccgccgctgcagctgatggacgagctgacgctgaccctgccgcgcaagatccgc
aaggagacccgcgaggcggtcgaggccgcgggcggcacgtggaaggcgcacgcgtcggag
tccgtgatcgaccggatggtcgaggagttcgaccgcaagggccggtcgacgggcgcgggc
ttctacgagtacgacgaaaacggcaagcgcaccgggctgtggccggggctgcgtgacgcg
ttcaagtcgggctcggccgaggtgccgttcgaggacctcaaggagcggatgctcttcgcc
gaggcgctcgagacggtcaagtgcttcgacgagggtgtgctgacgtcggtggccgacgcc
aacatcggctcgatcttcggcatcggcttcccggcctggacgggcggcgtcatccagtac
atcaaccagtacgagggtggcctgcagggcttcgtcgaccggtcccgcgagctggccgcc
cggtacggcgaccacttcgagccgccggcttcgctggtggagaaggccgccaagggcgag
atctacgaataa

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