KEGG   Amycolatopsis mediterranei U32: AMED_9155
Entry
AMED_9155         CDS       T01269                                 
Symbol
clpB
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpB
  KO
K03695  ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
amd  Amycolatopsis mediterranei U32
Brite
KEGG Orthology (KO) [BR:amd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:amd03110]
    AMED_9155 (clpB)
Chaperones and folding catalysts [BR:amd03110]
 Heat shock proteins
  HSP100
   AMED_9155 (clpB)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 ClpB_D2-small Clp_N AAA AAA_5 AAA_16 AAA_22 Sigma54_activat nSTAND3 ATPase_2 IstB_IS21 Mg_chelatase AAA_23 AAA_7 AAA_14 AAA_18 AAA_28 bpMoxR TniB AAA_3 NACHT AAA_25 AAA_24 ABC_tran T2SSE DNA_pol3_delta2 AAA_19 HOOK FTA4 Mis12 Mod_r
Other DBs
NCBI-ProteinID: ADJ50844
UniProt: A0A0H3DMD3
Position
complement(10002431..10005028)
AA seq 865 aa
MDAFNPTTKTQQAISSAAQAATMAGNPHVSAPHLLGALLAQGEGLTAPLLTAVGADPEVV
HKELEPLIAALPSATGATVSSPQFDTHAVKSLTRAQKLATELGDEYVSTEHLLVGLATEG
GQVADLLKRHGATPDALQEAFAKVRGSARITSADPESTFKALEKYGVDLTARARAGELDP
VIGRDTEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLAQRIIAGDVPESLRGKRVVA
LDLGSMVAGAKYRGEFEERLKAVLKEITDSAGEVVTFIDELHTIVGAGATGEGGAMDAGN
MIKPMLARGELRMVGATTLDEYRQHIEKDAALERRFQQVLVGEPSPEDTIAILRGLKERY
EVHHGVRITDAALVAAATLSDRYITARFLPDKAIDLVDEAASKLRMEIDSRPVEIDEVER
AVRRLEIEEMALAKESDAASKERLANLRAELAEKRETLTALTARWQNEKGSIERVRELKE
QLEQLRGESERAERDGDLGKAAELRYGRIPALEKEFEAATAASEASQQNVMLKEEVGADD
VADVVSAWTGIPAGRLLEGETGKLLRMEEELTRRVIGQAEAVQVVADAVRRARAGVADPD
RPTGSFLFLGPTGVGKTELAKALAEFLFDDERAIQRIDMSEYAEKHSVARLVGAPPGYVG
YDQGGQLTEAVRRRPYSVVLLDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTILI
LTSNLGSQAIADPSLDERQRRDAVLEVVQRQFKPEFLNRLDDIVVFHSLGTEQLTSIVDI
QIARLAKRLAQRRLNLDVTDSAREWLALNGFDPIYGARPLRRLVQSAIGDKLAKELLSGE
IRDGDTVRVDGPELEAGDALTVTRV
NT seq 2598 nt   +upstreamnt  +downstreamnt
atggacgctttcaacccgaccacgaagacccagcaggcgatctcgtccgcggcgcaggcg
gccaccatggccggcaacccgcacgtgtcggctccccatctgctgggcgccctgctggcg
cagggtgaggggctgaccgcaccgctgctgaccgcggtcggggccgacccggaagtggtg
cacaaggagctcgagccgctcatcgcggcgctgccgtccgcgaccggcgccaccgtgtcg
agcccgcagttcgacacccacgcggtcaagtcgctgacgcgcgcccagaagctcgccacc
gagctgggcgacgagtacgtctcgaccgagcacctgctcgtcgggctcgccaccgagggc
ggccaggtcgccgacctgctcaagcgccacggtgcgacgccggacgcgttgcaggaggcg
ttcgccaaggtccgcggctcggcccggatcaccagcgcggaccccgagagcacgttcaag
gcgctcgaaaagtacggcgtcgacctcaccgcgcgcgcccgcgccggcgagctcgacccg
gtcatcggccgggacaccgagatccgccgcgtcgtgcaggtgctgtcgcggcgcacgaag
aacaacccggtcctgatcggcgagccgggcgtcggcaagacggccatcgtcgaagggctg
gcccagcgcatcatcgccggggacgtgcccgagtcgctgcgcggcaagcgcgtcgtcgcc
ctcgacctcgggtcgatggtggccggcgcgaagtaccgcggcgagttcgaagagcggctg
aaggccgtgctcaaggagatcaccgactccgcgggcgaggtcgtcaccttcatcgacgag
ctgcacaccatcgtcggcgccggcgcgaccggcgagggcggcgcgatggacgcgggcaac
atgatcaaaccgatgctcgcccgcggtgagctgcggatggtcggcgcgaccacgctcgac
gagtaccgccagcacatcgagaaggacgccgccctggagcggcgcttccagcaggtgctc
gtcggcgagccgtcgccggaggacacgatcgcgatcctgcgcgggctgaaggagcgctac
gaggtgcaccacggtgtccggatcacggatgccgcgctggtcgccgccgcgacgctgtcc
gaccgctacatcaccgcgcgcttcctcccggacaaggcgatcgacctggtcgacgaggcc
gcgtcgaagctgcgcatggagatcgactcgcggccggtggagatcgacgaggtcgagcgg
gccgtgcgccggctcgagatcgaggagatggcgctcgccaaggagagcgacgccgcttcg
aaggagcggctcgccaacctgcgtgccgagctggccgagaagcgcgagacgctgacggcg
ctgaccgcgcgctggcagaacgagaagggctccatcgagcgcgtccgcgagctcaaggag
cagctcgagcagctgcgcggcgagtcggagcgcgccgagcgcgacggcgacctcggcaag
gccgccgagctgcgctacggccggatccccgcgctggagaaggagttcgaagcggccacc
gcggcgagcgaggccagccagcagaacgtcatgctcaaggaggaggtcggcgcggacgac
gtcgcggacgtggtcagcgcgtggaccggcatcccggcgggccggctgctggagggcgag
accggcaagctgctccggatggaggaggagctgacccggcgcgtcatcgggcaggccgaa
gccgtgcaggtggtggcggacgcggtgcgccgcgcccgtgccggcgtcgccgacccggac
cggccgaccggttcgttcctgttcctcggccccaccggcgtcggcaagaccgagctggcc
aaggcgctggccgagttcctgttcgacgacgagcgggcgatccagcggatcgacatgagc
gagtacgccgagaagcattcggtggcgcgcctggtcggtgccccgccggggtacgtcggc
tacgaccagggcggccagctgaccgaggccgtgcggcgccgcccgtactcggtggtcctg
ctcgacgaggtggagaaggcccacccggacgtcttcgacgtgctgctgcaggtcctcgac
gacgggcggctgaccgacggccagggccggacggtggacttccgcaacaccatcctgatc
ctcacctcgaacctcggttcgcaggccatcgccgacccgtcgctcgacgagcggcagcgg
cgggacgcggtgctcgaggtggtgcagcggcagttcaagccggagttcctgaaccggctc
gacgacatcgtcgtgttccactcgctcggcaccgagcagctgacgtccattgtggacatc
cagatcgcccggctcgccaagcggctggcccagcggcggctgaacctggacgtcaccgac
agcgcccgcgagtggctcgcgctcaacggcttcgacccgatctacggcgcccgcccgctg
cggcggctggtccagtcggcgatcggcgacaagctggcgaaggagctgctgtcgggcgag
atccgggacggcgacaccgtgcgtgtcgacggcccggagctggaggccggtgacgcgctg
accgtcacccgggtctga

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Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (32)   
   Pfam (32)   
All databases (50)   

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