KEGG   Apis mellifera (honey bee): 410266
Entry
410266            CDS       T01057                                 
Name
(RefSeq) replication factor C subunit 5 isoform X1
  KO
K10756  replication factor C subunit 3/5
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03030  DNA replication
ame03410  Base excision repair
ame03420  Nucleotide excision repair
ame03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    410266
   03410 Base excision repair
    410266
   03420 Nucleotide excision repair
    410266
   03430 Mismatch repair
    410266
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ame03032]
    410266
   03036 Chromosome and associated proteins [BR:ame03036]
    410266
   03400 DNA repair and recombination proteins [BR:ame03400]
    410266
DNA replication proteins [BR:ame03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    410266
  DNA Replication Termination Factors
   ELG1-RFC complex
    410266
Chromosome and associated proteins [BR:ame03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    410266
DNA repair and recombination proteins [BR:ame03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     410266
  Check point factors
   HRAD17(Rad24)-RFC complex
    410266
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_14 RuvB_N AAA_22 AAA_11 AAA_assoc_2 AAA_24 DNA_pol3_delta AAA_5 ResIII AAA_16 DUF815 DEAD AAA_30 AAA_7 PhoH AAA_19 AAA_3 Mg_chelatase AAA_2 TIP49 ATPase_2 bpMoxR
Other DBs
NCBI-GeneID: 410266
NCBI-ProteinID: XP_006566679
BEEBASE: GB45230
UniProt: A0A7M7MR07 A0A7M7GZA7
Position
LG11:14518146..14519986
AA seq 352 aa
MNSKPTQSTNLPWVEKYRPKKLDDLISHEEIIKTINKFIDENLLPHLLFYGPPGTGKTST
ILACARKLYTSAQFNSMVLEMNASDDRGINIVRGQILSFASTGTMYKSGFKLIILDEADA
MTNDAQNALRRIIEKYTDNVRFCIICNYLSKIIPALQSRCTKFRFGPLSIDQILPRLDTI
IKEENLNVTEDGKQALITLSGGDMRKVLNVLQSTWLAFGAVTEENVYSCVGHPLPIDIKN
IVNWLFNESYELCYCSILFSLLVQIIACLQIIIFLNTCSEIQDIKLKKGLALQDILTELH
LFINKIEFPDSILIDLIIKLAEIEKRVSIGCSEAVQLNALVSAFQNARDIET
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgaactcaaaacctactcaatccactaatttaccatgggtagaaaaatatcgaccaaaa
aaattggatgatttaatatctcatgaagaaattattaaaactataaataaattcattgat
gaaaatttacttccacatcttcttttttatggacctcctggcacaggaaaaacaagtaca
atacttgcttgtgcacgtaaattatatacatcagctcaatttaattcaatggttttagaa
atgaatgcttcagatgacagaggtatcaacatagttagaggacaaatacttagttttgca
agtacaggtacaatgtataagtctggttttaaattaatcattcttgatgaagctgatgct
atgacaaatgatgcacagaatgctcttaggagaataatagagaagtacacagacaatgta
agattttgtattatatgtaattatctcagtaaaattattcctgcccttcaatctcggtgc
actaaatttaggtttggccctctttctatagatcaaattttaccaaggctagacactatt
attaaagaagagaatttaaatgttacggaagatggaaaacaagcattaataacattgagt
ggaggagatatgagaaaagttttgaatgtccttcaaagtacatggcttgcttttggggca
gttacagaagaaaatgtttattcttgcgttggacaccctcttccgattgatataaaaaat
attgtcaactggctattcaatgaatcatatgaattgtgttattgtagtatccttttttcc
ttattagttcaaattattgcttgtctccaaattataatttttcttaatacatgttcagaa
atacaagatataaagttaaaaaaaggactggcattacaagatatattaacagaacttcat
ttatttataaataaaattgaatttccagattcgatacttattgatttaataataaaacta
gctgaaatagaaaagagggtatctattggttgtagtgaagcagtacaattaaacgctctt
gtttcagcgtttcaaaatgctcgcgatatcgagacttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEEBASE (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (7)   
   RefSeq(nuc) (3)   
   GenBank (2)   
   EMBL (2)   
Protein domain (26)   
   Pfam (26)   
All databases (70)   

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