KEGG   Apis mellifera (honey bee): 551822
Entry
551822            CDS       T01057                                 
Name
(RefSeq) ATP-dependent RNA helicase DDX42
  KO
K12835  ATP-dependent RNA helicase DDX42 [EC:5.6.2.7]
Organism
ame  Apis mellifera (honey bee)
Pathway
ame03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ame00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    551822
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ame03041]
    551822
Enzymes [BR:ame01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     551822
Spliceosome [BR:ame03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    551822
 Complex B
    551822
 Complex C
   U2 SnRNP specific factors
    551822
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C MscL
Other DBs
NCBI-GeneID: 551822
NCBI-ProteinID: XP_006557909
BEEBASE: GB54784
UniProt: A0A7M7GJC3 A0A7M7R9S0
Position
LG13:2895078..2898934
AA seq 772 aa
MSYHRGGGNKPKGFGFAGFQMTGTKRSGSNVPPPPPNSALSKQGYHTMNSITENALSACW
GMPKKRSKTEEEYFEDDDDPPPYSLEYIPAPGSPTYDWMKKSTPKEDSDSEEDPLDAFMA
GIDAEVKKNNYEAQLAEDERKEEKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQ
EIEYDEDGNPIAIPKKKEIDPLPPIDHSEIQYESFEKNFYNVHDEIANLNKQQVDDLRKT
LGIKVSGPSPPNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSGRDIIGIAK
TGSGKTAAFIWPMLVHIMDQRELKEGDGPIGLILAPTRELSQQIYQEARKFGKVYNVQVC
CCYGGGSKWEQSKALEGGAEIVVATPGRIIDLVKMKATNLTRVTFLVLDEADRMFDMGFE
PQVRSICNHVRPDRQTLLFSATFKKRVEKLARDVLTDPVRIVQGDVGEANADVTQHVIVF
NNNPTGKWTWLLQNLIEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIER
NKVITAFKKKEVSTLVATDVAARGLDIPHIRTVLNYDVARDIDTHTHRIGRTGRAGEKGT
AYTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAG
LGFRGRPEPSSTSSCSSSSQGSKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRAS
SDHTWEQTITRPSVIMPPPPPVPPKPNTEQSKTQDTQASGGERKRVRKSRWE
NT seq 2319 nt   +upstreamnt  +downstreamnt
atgagttatcaccgtggagggggtaataagccaaaaggctttgggtttgccggctttcaa
atgactggcacaaagagaagtggttctaacgtaccaccacctccaccaaattctgctcta
agcaaacaaggctatcatactatgaattccatcactgaaaatgctttatctgcatgttgg
ggaatgccaaagaaacgtagcaaaactgaggaagaatattttgaggatgacgatgatcct
ccaccatactccttggaatatattccggcgcctggatctcccacttatgattggatgaaa
aaatcaacaccaaaggaagatagcgatagtgaagaagatcctctagatgcatttatggct
ggtatagatgcggaagttaaaaaaaataattacgaagctcaactggctgaagatgaacga
aaagaagagaaatctaaaggattcagagcggatattgatggtgaggacgatgaagagagt
tattacaggtatatggaagaaaatccaaccgcgggtttgcaacaagaggaatctgatcaa
gagatcgaatacgacgaagacgggaatccaatcgcgattccaaaaaaaaaggagatagat
cctttaccacctatcgatcatagcgagatacaatacgaatctttcgagaaaaatttttat
aacgttcacgatgaaattgctaatttaaataagcaacaggttgacgatttaagaaaaact
ttagggataaaagtatctggtccatccccgccaaatccggtcaccagtttcggtcatttt
ggttttgatgatgcgttgatcaaagctattagaaaaaacgaatatactcaacctactcct
attcaagctcaagcagttcctgccgcactgagtggcagagatataataggtatagcaaaa
actggtagtggcaaaacagcagcttttatttggccaatgttggttcacattatggatcaa
agagaattaaaggaaggtgacggacctatcggtttaattcttgctcctacaagagaattg
tcgcaacaaatttaccaagaagcaagaaaatttggaaaagtatataatgttcaagtatgc
tgttgctatggcggaggtagcaaatgggaacaaagtaaagcattggaaggaggtgcagag
atagtagtcgcaacaccgggtagaataatagatttagttaaaatgaaggctacaaatttg
accagagtaacatttttggtattggatgaagctgatagaatgttcgatatgggttttgag
ccgcaagtgcgttctatatgtaaccatgtaagaccagacaggcaaacattgttgttcagt
gcaactttcaaaaagagggtagaaaagcttgctagggacgttttaacggatccagttagg
atagtccaaggggacgtcggtgaagcgaatgccgacgtcacacaacacgtgatagtgttc
aataataatccaaccggtaaatggacatggttattgcaaaatctgattgaatttttaagc
gctggtagtttattaattttcgtaactaaaaagctcaatgctgaagaacttgcgaataat
cttaaattaaaagaatttgatgttttacttttgcatggtgatatggatcaaattgaaaga
aacaaagtaataacggcttttaaaaaaaaagaagtcagtacattagttgctactgatgtt
gccgctcgaggtttggacattccacatatcagaaccgttcttaattacgatgtcgctaga
gatatcgatactcatacacatagaataggtagaacaggtagagcaggtgaaaaaggaaca
gcatatactcttgtaacggaaaaagacaaagaatttgctggtcatttagttcgaaatttg
gagggtgcgaatcaagaagtaccaaagagccttatggatttagcaatgcaaagtgcttgg
tttcgcaaatcaagatttaaaggtggaaaaggaaagagtttaaatgttggaggagctgga
cttggatttaggggaagaccggaaccttcttcgacatcgagttgcagttcctcatcacaa
ggatcgaaggacataagtgaagttgttaaaaaattagaaagacacggaccaggtagtgat
cggttatcagccatgaaagctgcattccgtagtcaatacaattctcaattccgggcatca
tcagatcacacgtgggaacaaactattacgcgaccttcagtgataatgcctccaccacct
cctgtacctccaaagccaaatacggaacaatcaaaaactcaggatacacaagcttccgga
ggagagaggaagagagtgagaaaaagtcgatgggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (100)   
   KEGG ORTHOLOGY (1)   
   RefGene (95)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   BEEBASE (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (6)   
   RefSeq(nuc) (2)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (5)   
All databases (120)   

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