KEGG   Astyanax mexicanus (Mexican tetra): 103027885
Entry
103027885         CDS       T05042                                 
Name
(RefSeq) cadherin-2-like isoform X1
  KO
K06736  cadherin 2, type 1, N-cadherin
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04514  Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    103027885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103027885
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:amex04515]
    103027885
   04090 CD molecules [BR:amex04090]
    103027885
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    103027885
Cell adhesion molecules [BR:amex04515]
 Cadherins
  Major cadherins
   103027885
CD molecules [BR:amex04090]
 Proteins
  103027885
SSDB
Motif
Pfam: Cadherin CADH_Y-type_LIR Cadherin_pro Cadherin_3 DUF2304 Stevor CD34_antigen DUF5385 DUF4381
Other DBs
NCBI-GeneID: 103027885
NCBI-ProteinID: XP_022533870
Position
16:complement(18315858..18547327)
AA seq 906 aa
MSLTVGRGSLLLFLLLSALQAGTDGRGTPLCRPGFAEDVYDAPLPEKLPEGQPLLTVRFH
DCGRGGSVRFECSRPTDFRIEQDGEVLSLQKLQLPSSSWTSSPLLVIARDVSTQEKWQTE
VRIQPSGGDKSQETADSRAVPEIVIPSRQLDGELKRMKRDWVIPPINVPENSRGPFPQEL
VRIRSDHDNKVNLRYSVTGPGADQPPTGIFSIDPISGELSVLKPLDREHIASFHLRAHAV
DLNGNQVENPIDIVINVIDMNDNRPEFVHQIWNGTVPEGSRPGTSVMTVTSEDKDDPRTQ
NGQLRYKILSQNPESPSSNMFTINNRTGSIITVAAGLDREKVPQYTLIIQATDMEGNPMY
GLSNTATAVIRVTDVNDNPPEFTADTFYGEVPENRVNAIVANLTVTDKDQPNTPAWNAVY
KITGGDPTGRFSVPTDPTTNEGLVTVVKPIDFETSRSFVLTVVAVNEVALERGIHLPRQS
TATVSIRVIDVNESPYFDPNPKLIRLDEGMPGESVLTTYTAQDPDRFMQQSMRYSKLSDP
ADWLRIDPNNGRITTIAVLDRESPYVQNNMYNATFLATDNGVPPASGTGTLQILLRDIND
NAPLVFPEEVEMCEKPEPNGINITALDEDLNPNAGPFAFELPYRPLDVRRNWTLTRLNGD
HAQLSLRIGFLERGIYKIPIVITDSGNLPMSNMSYLRLKVCHCDQNGDCTEHERAIAAGL
GTGAIIAILLCIIILLILVLLFVMWMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGE
EDQDYDLSQLQQPDTLEPDSVKPVGIRRLDERPLHPEPQYPVRSAAPHPGDIGDFINEGL
KAADNDPTAPPYDSLLVFDYEGSGSTAGSLSSINSSSSGGDQDYDYLNDWGPRFRKLADM
YGGTDE
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgtccctcaccgtgggccggggttcgcttctgctcttcctgctgctgtcagccctgcag
gctggcactgatggcagaggcaccccgctgtgcaggccgggattcgctgaagatgtgtac
gacgctccgctgcccgagaaactaccggagggacagccgctgctcaccgtgaggttccat
gactgtggacgaggtggaagcgtgaggtttgaatgtagccgaccgacggatttccggatt
gaacaggatggggaggtgctgtctctccagaagctccagctgccctcctcctcctggacc
tcctctccactactggttatagcgagggatgtctccactcaggagaaatggcagacggag
gtccggatccaaccctcaggaggcgacaagtctcaggagaccgccgactccagagccgtt
cccgagatcgttattccctccaggcagctggacggagagctgaagcgcatgaagagggac
tgggttattcctccgattaacgtcccggagaactccagaggcccttttccgcaggagctg
gtcaggatccgttcggaccatgataacaaggtgaacctgcgctacagtgtgaccggacct
ggagctgaccagccacccaccggcatcttctccatcgaccccatctcaggagaactgagc
gtgctcaagcctctggatcgagaacacatcgccagcttccatctgcgggcgcacgcagtg
gacctgaatggcaatcaggtggaaaaccccatcgacatcgtgatcaacgtgattgacatg
aatgacaaccgaccagagtttgtgcatcagatttggaacggaactgtgccggagggctcc
aggccaggtacgtcagtcatgaccgtaacgtctgaagataaggatgaccctcgcactcag
aacggtcagctgcgctacaagatcctctctcagaaccccgagagccccagctccaacatg
ttcaccatcaacaaccgcaccggcagcatcatcacggtggccgctggactggaccgagag
aaagttcctcagtacaccctgatcatccaggccacagatatggagggaaacccgatgtac
ggcctctccaacacagccaccgccgtcatcagagtgaccgacgtcaacgacaaccctcca
gagttcaccgccgataccttctatggtgaggtaccggagaaccgagtgaacgccatcgtg
gccaacctgaccgtgacggacaaggaccagcccaacactccggcctggaacgccgtgtac
aagatcaccggcggcgacccgaccgggcgcttctccgtccccaccgatcccaccactaat
gaggggctggtgaccgtggtgaagccaatcgactttgagaccagtcgatcgttcgtgttg
acggtggtcgctgtgaacgaggttgcgctggagcgaggaatccacctgccccgccagtcc
acagctaccgtctccatccgggtcattgacgtcaacgagagcccgtacttcgaccccaac
cccaaactcatcagactggacgaggggatgccgggcgagtctgtgctgaccacctacacg
gcccaggaccccgaccgcttcatgcagcagagcatgagatactctaaactctcagacccg
gccgactggctgaggatcgacccaaacaacgggcgcatcaccaccatcgccgttctggac
cgagagtccccatatgttcagaataacatgtacaacgccaccttcctcgccactgataac
ggtgtcccgccggccagtggaacaggtactctgcagatcctgctgcgggacattaatgat
aacgccccgctggtgttccccgaggaggtggagatgtgtgagaaaccagaacccaacggc
atcaacatcaccgccctggacgaagacctgaaccccaacgccggacccttcgccttcgaa
ctgccctaccggccccttgacgtcaggaggaactggaccctcacgcgcctgaacggtgat
cacgctcagcttagtctgaggatcggttttctggagaggggtatctacaaaatccccatc
gtcatcacagattcaggcaacctacccatgtccaacatgtcctatctgaggctgaaggtg
tgccactgcgatcagaacggagactgcaccgagcatgagcgtgctatagcggctggactg
ggcacgggtgccatcatcgccatcctgctctgcatcatcatcctcctcatcctggtgctg
ttgtttgtaatgtggatgaagaggagggataaggagcgtcaggccaaacagcttctgatc
gacccagaggacgacgtccgggacaacatcctcaaatacgacgaggagggaggaggagag
gaagaccaggattatgacctgagtcagctgcagcagccggacactctggagccggactcg
gtgaagcctgtggggatcagacggctggacgagagaccgctgcacccagagccgcagtac
ccagtcagatcagccgcaccgcaccctggagacatcggagatttcattaatgagggtctg
aaggcagctgataacgaccccacggctccgccgtacgactctctgctggtgttcgactac
gagggcagcggctccacggccggctcgctcagctccatcaactcgtccagcagcggcgga
gaccaggactacgattacctcaacgactgggggccgcgcttccgcaaactcgccgacatg
tacggaggcacggacgagtga

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