KEGG   Astyanax mexicanus (Mexican tetra): 103032165
Entry
103032165         CDS       T05042                                 
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
  KO
K15516  fragile X mental retardation protein
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103032165 (fmr1)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     103032165 (fmr1)
   Factors involved in mRNA localization
    Other mRNA localization factors
     103032165 (fmr1)
   mRNA cycle factors
    Stress granule specific factors
     103032165 (fmr1)
SSDB
Motif
Pfam: FXMRP1_C_core FXMR_C2 KH_9 Tudor_FRX1 KH_1 Agenet
Other DBs
NCBI-GeneID: 103032165
NCBI-ProteinID: XP_022539181
Position
24:4817223..4839883
AA seq 570 aa
MDELAVEVRGASGAFYKALIKDVHENTVTVAFENNWQPERQIPFHDVRFPPPVGVQKEIS
ESDDVEVYSRANDKEPCGWWAAKVRMVKGEFYVIEYAACDATLNEIVTLDRLRPVNPNKA
AAKNTFLKIRLDVPEDLRQMCAKESAHKDFKKAIGAFNVTYDSEKKQLVILSVNEVTTKR
ATMLTDMHFRSLRTKLALILRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQEAVRKARSYLEFSEDIIKVPRNLVGKVIGKS
GKLIQEVVDKSGVVRVRVEPENDKKTPPLEEGMVPFVFVGTKESISNARILLDYHLNYLK
EVDQLRMERLQIDEQLRQIGGGPRAPPGRPEKEKPFSADNGMGPSRGGKPFGRGGRGRRG
PTFASGTNSEASNASETESDHRDELSDWSLAPTDEESMGYPKRVSDGRKRGGGTRGRGGR
GRGGGGYKTEEMHWSESRSRNSRDSKPRPQEDSLQIRVDSNNERSVHASRAPQAPTGDAG
APRQRPVKERGLKKEKQDGQDGQVVVNGVS
NT seq 1713 nt   +upstreamnt  +downstreamnt
atggacgagctggcggtggaggtccggggggcgagcggggctttctataaggccttaata
aaggatgtgcatgaaaacacagtcactgtggcttttgagaacaactggcaaccagaacga
cagattccgttccacgatgttcgctttcctccccctgttggggttcagaaggagatcagt
gaaagcgatgatgttgaggtgtactccagggccaatgacaaggagccatgtgggtggtgg
gcagccaaagtgcgcatggtgaaaggagagttttatgttatagagtacgcagcctgcgat
gccacgctgaacgagatcgtcacgttagataggctacggcctgtgaatccaaacaaagcc
gctgcgaagaacacgtttctgaagatccgactggacgtccctgaagacttgcggcagatg
tgtgcgaaagagtctgctcacaaagacttcaaaaaagctatcggagcatttaacgtcaca
tacgactctgaaaagaaacagctggttattttgtcggtcaatgaggttacaactaaacga
gccaccatgctgacggacatgcacttcagaagcctgcgcaccaagctggccctcatcctg
cggaacgaagaggccagccgacagttggagagctctcggcagttggcctccaggttccat
gagcagtttgtggtacgtgatgatctgatggggctggccataggcacgcatggagcaaac
atccagcaggcccgcaaggtccctggagtcaccaacatagacctggatgaagagacctgc
acttttcacatctatggagaggaccaggaggcagtgcggaaagcgaggagctacctggag
ttttctgaagacattatcaaagtgcccaggaatttagtaggaaaagtcattgggaagagc
gggaagctgatccaggaggttgtggataaatctggggttgttcgagtaagggtagaacca
gaaaacgacaaaaaaacacctccattagaggagggcatggtgccatttgtgtttgttggg
acgaaagagagcatttcaaatgctcgtatactgctggactaccatctcaactatctgaag
gaggtggaccagttgcggatggagaggctacagatcgatgaacagttgaggcagattggt
ggaggacccagagctcctccaggcaggcctgagaaggaaaagcccttcagcgctgataat
ggcatgggaccttcacgaggaggcaaaccctttggccgcggtggcagaggaagacgaggc
cctacgtttgcttcaggtaccaactctgaagcttctaatgcatcagaaaccgaatctgac
cacagagatgagctgagtgactggtccctggccccgacagatgaggagtctatgggatac
cctaaacgagtctcggacgggcgcaagcggggcggaggcacccggggtcgaggaggaaga
ggcagaggaggagggggttacaaaactgaagaaatgcactggagtgagtcccgctcccgc
aactccagagactccaagccaaggcctcaggaggattccctgcagattcgagtcgacagc
aataacgaaagaagcgtgcatgccagccgagccccgcaagcacccaccggagacgccgga
gccccccgacagcggcccgttaaggagcgaggcttgaagaaagagaagcaggacgggcaa
gacggccaagttgtagtgaacggggtgtcataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (6)   
   Pfam (6)   
All databases (23)   

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