KEGG   Astyanax mexicanus (Mexican tetra): 103032365
Entry
103032365         CDS       T05042                                 
Symbol
rbm28
Name
(RefSeq) RNA-binding protein 28
  KO
K14573  nucleolar protein 4
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    103032365 (rbm28)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amex03009]
    103032365 (rbm28)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    103032365 (rbm28)
SSDB
Motif
Pfam: RRM_1 RRM_occluded
Other DBs
NCBI-GeneID: 103032365
NCBI-ProteinID: XP_007250998
Ensembl: ENSAMXG00000000763
UniProt: A0A8T2LT74
Position
18:8904735..8919978
AA seq 783 aa
MASLTLFVSNLPASASSAGLEELFSEVGPVKRCFVVKDKGSEKCRGFGYVTYSMAEDAQR
AQNEMKQYDGRKITVVPAKKKILKQKQGSKKAPQETEGSKEAAETEHSEETSETKCSEEA
SEKKSPQKSKGTRNNSKKARLIIRNLSFKCSEEELKETFSKFGTVLEATIPLKPDGKKRG
FAFVQFKNMLEAGKAIAATNMKEIKDRQVAVDWAVSKDKYTSTQSGAASGNKKDLNASVE
TEDDIDENEPPKKKSKPQLKKEEDDNDDDDDDDEDVDNSEGEEEEEDDESQEADSDDSGP
ASDVDDDDDDDDDDDDDDDDDDDEESDQKKKKKQKKTLPSDVNEGRTVFIRNLSFDSEEE
GIEECLLQFGELNYVRVVLHPETGHSKGCAFAQFKSKEAAEKCLAAAENDSEAGGLRVDG
RKLNIVLAVSRESATKLKTNKVKLHKGSRNLYLAREGLIRAGTKTAEGVSSADMAKRTRF
EDLKRAKLKDVNVFVSKTRLCIHNLPKAVDRQRLFKLCLSAAGGGKGVRITECHVMYDRK
PVRGQVVGKSLGYGFVEFKEHEHALQALRHLNNNPTIFTDNKRPIVEFSLEDGRKLKLKA
MRQQKSKEKPAPNSAAQKNPSQKAGEQEGGSKKPKQKKSPGKNKPAGTRSDHRQQNKGAQ
SGHFSGFRTKAEVEHVEMEDGKKRQKVLPMPSHRGPKIRHRDKGKQQPQSKKAKRGLSRK
DRKASFSLEKPNQNKKQSAKPVKRHPRNKDNDRFDNLVAQYKNKLLGASSSKGSLIKKSK
WFS
NT seq 2352 nt   +upstreamnt  +downstreamnt
atggcttcactcactttattcgtgtctaatttacccgcttcagccagcagtgctggtctg
gaggagctgttctctgaggtcgggccggtgaagcgctgcttcgtggttaaagataaagga
tcagagaaatgtcgtggattcggctatgttacatactccatggcagaggacgcccaacga
gctcagaatgaaatgaaacagtatgacggacgcaaaataaccgtcgttccggcaaagaaa
aagattcttaagcaaaaacaaggaagcaagaaagccccacaagaaacagaaggttccaaa
gaggcagcagaaactgaacactctgaagagacatcagaaaccaaatgttctgaagaggca
tcagaaaaaaaaagtcctcagaagtctaaagggaccagaaacaattcgaagaaagccagg
cttatcatcagaaatcttagttttaaatgctctgaggaagagctcaaagaaaccttctca
aagtttggaactgtcctggaggctacaatccctctcaaaccagatgggaagaaacgaggc
tttgcttttgtacagtttaaaaacatgcttgaagcaggaaaagcgattgcagctacaaac
atgaaagaaattaaagacagacaggttgctgtagactgggctgtgtcgaaagataagtat
acgagtactcagtcaggcgcagcttcaggaaataaaaaagatctcaacgcttcagtggag
acagaagatgacatagatgaaaatgaacctccaaagaaaaagtccaaaccacagctaaag
aaggaggaagacgacaatgacgacgatgatgacgatgatgaagatgttgacaacagtgaa
ggtgaggaggaggaagaggatgatgagtctcaggaagctgacagtgatgatagtggacct
gcatcagatgtcgatgatgatgatgatgatgatgatgatgatgatgatgacgatgacgac
gacgacgatgaagaaagtgatcagaagaaaaagaagaaacagaagaagacccttccatct
gatgtgaatgaaggaagaactgtgtttatcagaaacctgtcctttgactcggaggaggag
ggaattgaagagtgtctgttacagtttggagagctgaactatgtgcgggtggtgctgcat
cctgaaacaggacactcaaaaggctgtgcctttgctcagttcaaatctaaagaggcagca
gagaaatgtctggcagctgctgagaacgactctgaggctggtggactgagggttgatggg
cggaagttgaatattgtgttggcggtgagcagagagagtgctactaaactgaagacgaat
aaagtgaaactgcacaaaggatccaggaatctctacctggccagagagggattgattcgt
gctggaaccaaaacagcagaaggagtgtccagcgctgatatggccaaaaggacacggttt
gaggaccttaagagggcgaaactcaaggatgtgaacgtgtttgtatccaaaacgagactg
tgtattcataatctccccaaagctgtggaccgacaacgcctctttaagctctgcctatca
gctgcagggggaggcaagggggtccgcattactgagtgtcatgtgatgtatgacaggaag
ccggtgcgaggtcaggtggttggaaagtctctaggctacggttttgtggaatttaaggag
catgagcacgcacttcaggcgctgcgccaccttaacaacaaccccaccatcttcactgat
aacaagaggcctatcgtggagttttctttggaggatggaaggaagttaaaactgaaggcc
atgagacagcagaagagcaaggaaaaacctgcccctaactctgcagctcagaagaatcca
tcccaaaaagctggagaacaagaaggaggtagcaagaagcccaagcagaagaaatctcct
gggaagaataaacctgctggaactagatctgaccacaggcagcagaacaaaggagcacag
agtggtcacttctcaggtttcaggaccaaggcagaagtggaacacgtggaaatggaggac
ggcaaaaaacggcagaaggttcttcccatgccctcacacaggggtcctaagatcaggcac
agagataaaggaaaacagcagcctcagtccaagaaagcgaagagaggattgagcaggaag
gacagaaaagcatcgttttcgctggagaaacccaaccagaataagaaacagagcgctaaa
ccagtgaagagacatccccggaacaaagacaatgaccgctttgacaatctggtggcgcag
tacaagaataaactcctgggtgcctctagctctaagggttctctcatcaaaaagagcaaa
tggttcagctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (61)   
   KEGG ORTHOLOGY (1)   
   RefGene (56)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (70)   

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