KEGG   Astyanax mexicanus (Mexican tetra): 103034009
Entry
103034009         CDS       T05042                                 
Symbol
fdft1
Name
(RefSeq) squalene synthase isoform X1
  KO
K00801  farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex00100  Steroid biosynthesis
amex01100  Metabolic pathways
Module
amex_M00101  Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:amex00001]
 09100 Metabolism
  09103 Lipid metabolism
   00100 Steroid biosynthesis
    103034009 (fdft1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:amex01006]
    103034009 (fdft1)
Enzymes [BR:amex01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.21  squalene synthase
     103034009 (fdft1)
Prenyltransferases [BR:amex01006]
 Terpene biosynthesis
  Squalene/phytoene synthase
   103034009 (fdft1)
SSDB
Motif
Pfam: SQS_PSY Octopine_DH CNV-Replicase_N
Other DBs
NCBI-GeneID: 103034009
NCBI-ProteinID: XP_022523657
Position
Unknown
AA seq 452 aa
MAGVCCKSSAPFSVFKRTLSVRSSTSTPRPLCLTVGRRGAQEGCLTARPPHLKTASPHRH
TACLFFSCQESMSETLRTCYVYLNQTSRSFAAVIQALDGELRHAVCIFYLVLRALDTVED
DMTIPLEKKVPLLHEFHTFLYQPEWCFTESKEKDRQVLEDFPSISVEFRNLGQEYREVIS
DICHRMGFGMAEFLEKKVSSMKEWDKYCHYVAGLVGVGLSRLFSASQLEDPEVGRDTELA
NSMGLFLQKTNIIRDYLEDQQEGRAFWPEEAWSQFASRLEDFAQPQNLTSALACLNLLVT
DALRHVPDVISYLSRLRNQSVFNFCAIPQVMAIATLSACYNNPQVFQGIVKIRKGQAVTL
MMEATNMQTVQNIIAQYTQEILQKVSLSDPSRDKTLCILGVIQEKTLARTALSSRSHHLS
PFYLSAAMLLAALSWQYLNAAQSTGSTDMQGS
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggcaggagtttgctgtaagagctcggcgccgttctccgtcttcaagcgcactctctcg
gtgcggagctccacctccaccccgcggccgctgtgtctaaccgtgggtcggagaggagct
caggagggctgcctgaccgcccgacccccccacctgaagaccgccagccctcatcgacac
actgcctgtctcttcttctcttgtcaggaatccatgagcgagactctgaggacctgctac
gtttatctgaaccagaccagcaggagcttcgccgctgtgattcaggccctggacggagag
ctgcgccatgcagtttgtatattctacctagtccttcgggcactggacacagttgaggat
gacatgacgattcctttggagaagaaggttccactgctgcacgagttccacactttcctc
taccagccagaatggtgcttcacagaaagtaaagagaaagaccgtcaagtcctagaggac
tttccctcgatttcagtggagtttaggaacctcggccaggagtatcgcgaagtgatttct
gacatttgccacaggatggggtttggcatggcagaatttcttgagaagaaagtcagctca
atgaaagagtgggataagtactgtcactacgtggctggtctggtgggtgtgggtctatct
cggcttttctctgcatctcaactggaggatcctgaagtaggacgagacactgaattggcc
aactccatgggcttgttcttacaaaagacaaatattatcagggactacctggaagaccag
caggaaggccgagctttttggccagaagaggcatggagtcagttcgcttctcgattggag
gactttgcacaaccgcaaaacttgacttcagccctggcctgcctcaacctgctagtaact
gatgctttgcgacatgtccccgatgtaatctcctacctgtcccgtctccgcaatcagagc
gtcttcaacttttgtgcgatcccacaggtgatggcgatagcgactctctctgcatgttac
aacaacccacaggtgttccagggcattgtgaaaatcaggaaggggcaggcggtcactttg
atgatggaagctactaacatgcaaactgttcagaacatcattgcacagtacactcaagag
attctacagaaagtctctctgtctgatccgtcgcgggataagacattgtgcatactgggg
gtaatccaggaaaagacacttgctagaacagcactgtcctcccgatctcaccacctctct
cctttctacctttctgctgccatgctcctcgctgctctcagctggcagtatctcaatgcc
gcacagtctacaggcagcacggacatgcagggcagctaa

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