KEGG   Astyanax mexicanus (Mexican tetra): 103045387
Entry
103045387         CDS       T05042                                 
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
  KO
K07889  Ras-related protein Rab-5C
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04137  Mitophagy - animal
amex04144  Endocytosis
amex04145  Phagosome
amex04148  Efferocytosis
amex05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103045387 (rab5c)
   04145 Phagosome
    103045387 (rab5c)
   04137 Mitophagy - animal
    103045387 (rab5c)
   04148 Efferocytosis
    103045387 (rab5c)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    103045387 (rab5c)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103045387 (rab5c)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    103045387 (rab5c)
   04031 GTP-binding proteins [BR:amex04031]
    103045387 (rab5c)
Membrane trafficking [BR:amex04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    103045387 (rab5c)
 Endosome - Lysosome transport
    103045387 (rab5c)
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103045387 (rab5c)
  Exosomal proteins of other body fluids (saliva and urine)
   103045387 (rab5c)
  Exosomal proteins of colorectal cancer cells
   103045387 (rab5c)
  Exosomal proteins of bladder cancer cells
   103045387 (rab5c)
GTP-binding proteins [BR:amex04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    103045387 (rab5c)
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase AAA_16 MCR_beta BrnT_toxin
Other DBs
NCBI-GeneID: 103045387
NCBI-ProteinID: XP_007256330
Ensembl: ENSAMXG00000000444
UniProt: A0A8B9LBX2 A0A3B1KI46
Position
2:5422178..5450200
AA seq 221 aa
MAGRGGPARTNGATAAGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL
TQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKEL
QRQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIA
KKLPKNEPQGGAGPGGRARGGVDLQEAAPQGRSGQCCGGGN
NT seq 666 nt   +upstreamnt  +downstreamnt
atggcggggcgaggaggaccagcgcggactaacggcgccaccgccgccggaaacaaaatc
tgccagtttaaactggtgttactcggggagtcagctgtgggcaagtccagcttggtcctg
cgcttcgtcaagggccagttccacgagtaccaggagagcaccattggagctgcattcctc
acacagacagtctgtttggatgacacgacagtaaagtttgagatttgggacacagccgga
caggagcgataccacagtctggccccaatgtactacagaggagctcaggccgccattgta
gtctacgacattactaacacagacactttcactcgagcaaagaactgggtaaaggagcta
cagagacaggccagccccaacattgtcattgctctggctgggaacaaggctgaccttgcc
aacaagagagctgttgattttcaggaagcacaggcgtacgcagatgacaacagcctgctg
ttcatggagacatccgctaagactgccatgaatgtcaacgagatcttcatggccatcgct
aaaaagcttccgaagaacgagccgcagggtggagcaggacctggaggacgagccagaggc
ggagtagacttgcaggaggcggcacctcagggcagatccggccagtgctgtggaggcgga
aactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (31)   
   KEGG ORTHOLOGY (1)   
   RefGene (26)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (55)   

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