KEGG   Astyanax mexicanus (Mexican tetra): 103046998
Entry
103046998         CDS       T05042                                 
Symbol
ddx54
Name
(RefSeq) ATP-dependent RNA helicase DDX54
  KO
K14808  ATP-dependent RNA helicase DDX54/DBP10 [EC:5.6.2.7]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amex03009]
    103046998 (ddx54)
Enzymes [BR:amex01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103046998 (ddx54)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    103046998 (ddx54)
SSDB
Motif
Pfam: DEAD Helicase_C DBP10CT ResIII DNA_pol3_chi
Other DBs
NCBI-GeneID: 103046998
NCBI-ProteinID: XP_007254057
Ensembl: ENSAMXG00000009189
UniProt: A0A8B9HBF5 W5KPD5
Position
Unknown
AA seq 856 aa
MAQRKKKLTKKRRNTGHRESDGDSDGGDFELAAEIKDDSVAAGSKLPRFPASSDYLSDVE
PDTREMVRAQNKKNKKSGGFQSMGLSYPVYKGVMKKGYKVPTPIQRKTIPVILDGKDVVA
MARTGSGKTAAFLVPMFERLKAPQAQTGARALILTPTRELALQTMKFTKELGKFTGLKTA
LILGGDSMDDQFAALHENPDIIIGTPGRLMHIVMEMNLKLNNVEYVVFDEADRLFEMGFA
DQLQEIIRRLPETRQTLLFSATLPKLLVDFARAGLTEPVLMRLDVDTKLSDQLKLAFFHL
RLDDKPALLLHLLRNVVKPQEQTVVFVSTKHHVEYLNQLLTAEGIECAYIYSALDQTARK
INIGRFVHRKAMVLLVTDVAARGIDIPMLDNVINYNFPSKAKLFLHRVGRVARAGRSGTA
FSLVCPDEVAFVFDLHLFLGRPLVFATVDHPQDADGVMGRVPQSILDDEEAHLFTTHDNS
QDLQTLKRISENAYKQYLKSRPNPSPESIKRVKSTDLSSIAVHPLLGSGLERVELERLQM
VDSIKAYKAKSTIFEINSNNKTSASEVMRTKRSRDSRLVDKFHRTREEQLAESNLNKPAI
RSANTPKPQHSEEEEEDLQGVFSEVVGGKRRKKDEEMEVDRPKSKKNRQSGRDEEFYIPY
RPKDFNSERELSLAGQGNAFEQQASSAVLDLMGDEGNTLNQHKSIMKWDRKRKRFICDTG
KEDKKNKIKTDSGQVISAKKKKKNFYEEWKKKYKVDEEVSDSDGENGGMKGQKFGGRRGR
KGRGSQPQSKSGSRMNSELKNRDQILKQRKKKAKQQFLQSGGLKKLRGKNRQHVQQVMKS
GFGRGSFKKGKMKKRL
NT seq 2571 nt   +upstreamnt  +downstreamnt
atggcgcagagaaagaagaaactgactaagaagaggaggaacacggggcacagggagtct
gatggagactcggatggaggagattttgaactggctgcagagattaaagacgacagtgtg
gctgctggttcgaaactaccccgctttcctgcctcatcagattacctgtcagatgtggag
ccagacactagagagatggttagagctcagaataagaagaacaaaaagtctggtggcttt
cagtccatgggtctaagctacccagtctataaaggtgtaatgaagaagggctacaaagtt
cccacaccaatccaaagaaaaacgattccagtaatcctggatggtaaggatgtggttgcc
atggccagaacaggaagtggaaagacggctgcttttttggtccccatgtttgagaggctg
aaggctccacaggctcaaactggtgctagagctttaatcctcacacccactcgagaactg
gcactgcaaaccatgaagttcaccaaagagttgggcaagttcactgggctgaagactgca
ctgattcttggtggagacagcatggacgatcagtttgctgctttacatgagaatccagac
atcatcattggtacgcctggtcgtctgatgcacattgttatggaaatgaacctgaagctg
aataatgtggagtatgtggtgtttgatgaggcagataggctgtttgagatgggctttgcc
gatcagcttcaggagatcatcagacgactccctgaaactcgccagacattgctcttctct
gccacgctgcccaaactgcttgtggactttgccagagctgggctgactgaaccagtcttg
atgcgactggatgtagacactaagcttagcgatcagttaaagctggcattctttcacttg
cgcttggatgacaagccagccctgctgctgcatctgcttcgtaatgtagtgaaacctcaa
gagcagacagtggtgtttgtgtccactaaacaccatgtggagtacttgaaccagcttctg
actgctgaaggaattgagtgtgcctacatctacagtgctctggaccagacagccagaaag
atcaatattggccgttttgtccaccgtaaagcaatggttcttctggtgactgatgtggca
gctcgtggtattgacatccccatgctggacaatgtcatcaattacaacttcccttccaag
gccaagctttttctgcacagagtcggtcgtgtagcccgtgctggcaggagtggaacagcc
ttcagcttggtttgcccagatgaagtggcctttgtttttgaccttcacctctttcttggt
cgtccattggtgttcgcaaccgttgaccatccccaggatgctgatggtgtcatgggtcgt
gtgccacagagcatcctagatgatgaggaagcacacctcttcaccacccatgataactca
caagacctccagacccttaaacgaatctcggagaacgcttacaagcagtaccttaagtca
cgacccaacccctcacctgaatccattaaacgagtgaagtccacggatctgtcttccata
gctgttcacccattgctggggtcaggacttgagagggtggaactggaacgattgcaaatg
gtggactccatcaaagcatacaaggcaaaatctactatatttgagatcaactccaacaac
aaaaccagtgcgagtgaggtgatgcggacgaagcgctctcgggatagtcggttggtggac
aagtttcacaggacgagggaggagcagcttgcagagagtaatctcaataaaccagctatt
cggagtgctaacacaccaaaaccacaacacagtgaagaagaggaggaggaccttcagggt
gtattctcagaagttgtaggaggaaaaagacggaaaaaggatgaagaaatggaggtggac
agaccgaagagcaaaaagaacaggcagtctggtcgagatgaggaattttacatcccttac
agacccaaagactttaattcagagagagaactcagtcttgcagggcagggcaacgcgttt
gagcagcaggcttcctcagctgtgctggacctgatgggggatgagggcaacacactgaat
cagcacaagagcataatgaagtgggatcgcaagagaaaacgcttcatttgtgacactgga
aaagaagataagaaaaacaagataaaaacagacagtggacaagtcatcagtgccaagaaa
aagaagaagaatttctatgaggaatggaagaagaagtacaaagttgatgaagaggtgtct
gattcagatggagagaatggaggaatgaagggacagaaatttggaggacggagaggacga
aaggggcgtggctctcagccccagagcaaaagtggctccagaatgaattcagagctgaag
aacagagatcagatcctcaaacagcgaaagaagaaggccaagcagcagttcctgcagagt
ggcggcctgaagaagctacgtggcaaaaacagacagcacgtccagcaggtcatgaagtct
ggctttggccgtggaagctttaagaaaggcaagatgaagaagagactgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (36)   

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