KEGG   Astyanax mexicanus (Mexican tetra): 107196797
Entry
107196797         CDS       T05042                                 
Name
(RefSeq) H-2 class II histocompatibility antigen, A-U alpha chain-like isoform X1
  KO
K06752  MHC class II antigen
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04145  Phagosome
amex04514  Cell adhesion molecules
amex04672  Intestinal immune network for IgA production
amex05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amex00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    107196797
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    107196797
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    107196797
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107196797
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amex04147]
    107196797
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107196797
  Exosomal proteins of epithelial cells
   107196797
  Exosomal proteins of breast milk
   107196797
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3
Other DBs
NCBI-GeneID: 107196797
NCBI-ProteinID: XP_022520190
Position
Unknown
AA seq 200 aa
MKLCMILTCALLLFTEAKVLHRDISLILCSETDREQIYGLDGEEMWHADFRLEKGVMTLP
QFADPYSYVEGTYEGAVSNIETCKSNLANSKKANNYPAEPKDDPHVSVYSKDDVVLGYKN
TLICYISGFYPAHVGVSWTRNNVNVTDEASLSRYYVNDDGSFNLVSALSFTPEEGDIYTL
PLWRHGALERPYDQNMGCAG
NT seq 603 nt   +upstreamnt  +downstreamnt
atgaagctgtgcatgattcttacctgcgctctacttctcttcacagaagctaaagttctg
cacagagatatctcattaatcctctgttcagagacggacagagagcagatttatggtctt
gatggagaggagatgtggcatgctgatttcagactggagaaaggagtgatgacgctgccg
cagttcgcagatccgtactcctatgtagaaggaacctatgagggcgctgtttctaatata
gaaacctgcaaatctaacttggctaattctaaaaaagctaacaactaccctgcagaacca
aaagacgatcctcatgtctcagtctactctaaggatgatgtggtgctgggctataaaaac
accctcatctgctacatatctggattctacccagcacatgtgggagtgtcctggaccagg
aacaatgtaaacgttacagatgaagccagtctgagtagatattatgttaatgatgatgga
tcctttaacctggtctctgctctgagctttactccagaggagggagatatctacaccttg
ccactgtggaggcacggagccctggagagaccatacgaccaaaatatgggatgtgcaggc
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system