KEGG   Alteromonas macleodii English Channel 673: AMEC673_06125
Entry
AMEC673_06125     CDS       T02254                                 
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
amg  Alteromonas macleodii English Channel 673
Pathway
amg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    AMEC673_06125 (ruvB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amg03400]
    AMEC673_06125 (ruvB)
Enzymes [BR:amg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     AMEC673_06125 (ruvB)
DNA repair and recombination proteins [BR:amg03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     AMEC673_06125 (ruvB)
    RecFOR pathway proteins
     AMEC673_06125 (ruvB)
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 AAA_14 Mg_chelatase AAA_3 AAA_16 nSTAND3 RNA_helicase Rad17 AAA_18 Bac_DnaA NTPase_1 AAA_17 TIP49 AAA_2 NB-ARC Sigma54_activ_2 AAA_28 AAA_24 TsaE ATP-synt_ab ABC_tran IstB_IS21
Other DBs
NCBI-ProteinID: AFT73922
Position
1445288..1446292
AA seq 334 aa
MIEADRLITPEASTEDEVIDRAIRPKMLEDYTGQPHVCEQMEIFIQAARNRDDALDHLLI
FGPPGLGKTTLANIVANEMGVNIKTTSGPVLEKAGDLAALLTNLERNDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYNVKDLTSIVARSASYLNLDMNDEGAQEVARRSRGTPRIANRLLRRVRDYAEIKADG
TVGADTAAKALDMLDVDKEGFDYMDRKLLTAIIEKFDGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFLQRTPRGRIVSQRAYLHFGFAPSE
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgattgaagccgacagactgattacgcctgaagccagcaccgaagacgaggtcatcgac
cgcgccattcgccctaaaatgctggaagactatacggggcagcctcacgtatgtgagcaa
atggaaatttttattcaagctgcgcgtaatcgcgacgatgcgctagaccatctacttatt
ttcggtccgccaggactgggtaaaaccacgcttgcgaacattgtggcaaatgaaatgggc
gtgaacattaaaaccacgtcaggccctgtgcttgagaaagctggcgacttggctgcactg
cttaccaaccttgagcgcaatgatgtattgttcatagacgaaatacatcgcttaagccca
gtggtagaggaaattctctatcctgccatggaagactatcagcttgatattatgataggc
gaggggcctgccgcccgttcaattaagctagaccttcctccttttacgctggtaggcgct
accacccgcgcaggctcgctaacgtcgccattacgcgaccgtttcggcattgttcaacgc
cttgagttttacaacgtaaaagaccttaccagtattgtggcaagaagtgcgagctatctg
aatttagacatgaacgatgaaggtgcgcaagaagtggctcgtcgttcgcgtggcacaccg
cgtattgccaatcgtttgttacgccgtgttcgagactacgcagaaattaaagcagacggc
acggtgggggccgatacggcagcgaaggcactggatatgcttgacgttgataaagaaggt
ttcgattacatggatcgtaaattgcttactgctattatcgaaaagtttgatggtgggcca
gtaggcttagacaatttggcagcagccattggtgaggaaaaagaaaccatagaagacgtg
attgaacccttccttattcagcagggctttttacagcgcacgcctcgaggccgtattgtg
tcgcagcgcgcttatcttcattttggtttcgctccgtctgaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (27)   
   Pfam (27)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system