KEGG T02254: AMEC673

Alteromonas macleodii English Channel 673: AMEC673_11290

Entry

AMEC673_11290 CDS T02254

Definition

exodeoxyribonuclease V subunit alpha

Orthology

K03581

exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]

Organism

amg Alteromonas macleodii English Channel 673

Pathway

amg03440

Homologous recombination

Class

Genetic Information Processing; Replication and repair; Homologous recombination [PATH:amg03440]

SSDB

Motif

Pfam:

AAA_30 UvrD_C_2 AAA_19 Viral_helicase1 AAA_11 Helicase_RecD DUF2075 AAA_22 PhoH UvrD_C UvrD-helicase IstB_IS21 Flavi_DEAD ResIII PaREP1

Other DBs

NCBI-GI:

407684151

NCBI-GeneID:

13740007

UniProt:

K0CQE3

Position

complement(2632428..2634635)

AA seq 735 aa
MKSNQHSVPSFFDNLFGIEAIDKFVAKEFGFIDELEQEEQFIWAGILAYLSYMQRNGHSC
IYLKDIAGTTLFKEVVAEQEAVLAAETNVHSNNGAVGASKSPVEQTEQEKAPKAGVDVPQ
LTPLLRIVKSALVNEQVAQLFVYSNGKLYSRRYYEFEQEVARNVVKRAALTPLSDDASEK
VKQLWPAIFPTETTDQQDWQQIAVAKSLMQRFCVINGGPGTGKTYTVLRLLLALQACDEN
LKIVLAAPTGKAQQRMTESIMNSIDGLRGKLDDTVLNNVPTDAVTLHRLLGLREHGVSTK
FNQHNQLAADVLIVDEASMVDLALMTRIVRALPDHARLYFIGDADQLPAVELGNVLEQLV
STEAASFDENANVPNGTNSLNSNDNAFSLDGVPSLMRQHIATLCPHLPLLPVDEQAKSYV
ATLQAPQRFKGQVAKVATAIQRGDASGALAAITDKASDNDETAGLNSNIDSTLVSKTASR
LQSGVHLWPEHQVSGRDLHQLAKESFLPIFDAGSAEEALNRLNVVRWLTPVRKGGMGVEG
LNNLVFDAIKHKIRKREGHFYQGQPIMIVKNHHPQRLSNGEVGVIWPDSKGKLYAWFYQD
SQASGQNGSNQKASANAGDSADNTLEQKQALRSISLSRVPQFETVYAMTIHKSQGSEFNH
VVLILPKPDSEKAANLFHRGLVYTGLTRAKDGCLIISDNATFTHMVQRVDKRYSGLSEAI
SLHLESTSNATTEIE

NT seq 2208 nt +upstreamnt +downstreamnt
atgaaaagcaatcaacactctgtaccgtcattttttgataacttgtttggcatcgaggcg
atcgacaaatttgtcgcaaaagaatttggctttattgatgaactggagcaagaagaacag
tttatttgggctgggatcttagcatacttgtcgtatatgcagcgcaatggccacagctgt
atctatctaaaagacatagcgggtacgacgctttttaaagaggtagtagcagaacaagaa
gcagtcttggcggccgaaacaaatgtgcatagcaataacggagcggttggggcatctaag
tcgccggtagaacaaacagagcaggaaaaagcgcccaaagcaggtgttgacgtgccacaa
ctaacgccgttacttagaattgtaaaaagcgcactggttaacgagcaggtggctcaacta
tttgtctatagcaacggcaagctgtacagccgtcgctactatgagtttgaacaagaagtg
gcgcgcaatgttgtaaaacgagctgcgcttacgccgttaagtgatgacgcaagcgaaaaa
gtaaaacaactttggcccgcaatctttcctaccgaaacaaccgatcagcaagattggcag
caaattgcagtggccaaaagcctaatgcagcgcttttgcgttataaacggtgggccagga
acaggtaagacctatactgtattgcgcttattactggcgctacaggcttgcgatgaaaac
ttaaaaattgtgctggcagcgcctacaggtaaagcgcaacagcgtatgaccgaatctatc
atgaacagcatagacgggcttcgcggcaagttggacgacacagtgcttaacaacgtgcct
accgatgctgtgacgctacatagattactaggattgcgcgagcacggtgtatcgactaag
ttcaatcagcacaatcaattggcagcagatgtactcattgtcgatgaagcaagtatggtc
gacttagcgctaatgacgcgcatcgtacgagcgttaccagaccatgcgcgactctatttt
atcggtgatgccgatcagcttccagcagttgagcttggcaacgtgttagagcagctagtt
agtaccgaggcagcaagttttgacgaaaatgcgaatgtgccaaatggtacaaatagctta
aacagcaatgacaacgcgttttctttagatggcgtgccatcgttaatgcgtcagcacatc
gctacgctgtgcccgcatttgcctctgttacctgttgatgagcaggcaaaaagctatgta
gcaactctgcaagcaccgcagcgcttcaaagggcaggtggcaaaagttgcaacggccata
cagcgaggtgatgcaagcggtgcacttgccgctattaccgacaaggctagtgacaatgat
gaaactgctggcctcaactcaaatatcgattcaactcttgtttcaaagactgcatcacgc
ctacaatctggcgttcacctatggccagagcaccaggttagcggccgtgatttacaccag
ttggccaaagaaagcttcctgcctatttttgatgctggcagtgccgaagaggcgcttaat
cgtctgaatgtggttaggtggctaaccccggtccgcaagggcggaatgggcgtagaaggc
ctgaataatttggtgttcgatgctatcaagcacaaaatcagaaagcgggaaggccatttc
tatcaaggtcagcccattatgattgtaaagaatcatcatcctcaacgactatcaaacggt
gaggttggtgtaatctggcctgacagcaaaggaaagctatatgcgtggttttaccaggat
agccaagcttcgggtcaaaacggttcaaatcagaaagcttcggcaaatgcgggagacagt
gctgacaatacgctagagcaaaagcaagcgttgcgcagcatatcgctatcaagagtaccg
cagtttgaaactgtgtacgccatgaccatacataaatctcagggctctgagtttaatcat
gttgtgcttattttacctaagcctgatagcgaaaaagccgccaacttatttcatcgaggc
ctagtgtacacagggttaacccgtgccaaagacggctgcttaatcatttctgacaacgca
acatttacccacatggttcaacgggtagataagcgttattccgggctgtctgaagcgatt
agcctgcacctagagagcacatcaaacgccaccacagaaattgaataa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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