KEGG T00957: Amir

Actinosynnema mirum: Amir_4685

Entry

Amir_4685 CDS T00957

Gene name

gabD2

Definition

succinic semialdehyde dehydrogenase

Orthology

K00135

succinate-semialdehyde dehydrogenase (NADP+) [EC:1.2.1.16]

Organism

ami Actinosynnema mirum

Pathway

ami00250	Alanine, aspartate and glutamate metabolism
ami00350	Tyrosine metabolism
ami00650	Butanoate metabolism
ami01100	Metabolic pathways
ami01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Butanoate metabolism [PATH:ami00650]
Metabolism; Amino acid metabolism; Alanine, aspartate and glutamate metabolism [PATH:ami00250]
Metabolism; Amino acid metabolism; Tyrosine metabolism [PATH:ami00350]

SSDB

Motif

Pfam:

Aldedh

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(5571598..5573214)

AA seq 538 aa
MSTEQSRVSEHAATGERPAWVTDEVVARWCERVRRDVTRRGGGAPDPVVATAPYDLAPVA
TVPACAPEDVASAVVTARDAQRAWGKSSFALRAEVVLAFHDLLLARQDQVLDLIQWETGK
ARYHAWQEVAQVATIARHYARRARHYLAPKRVRGMVPVLTKVREVRVPKGVVGVISPWNY
PLYLGVGDVLPALMAGNAVVSKADSQTALTLLWTRLLMAEAGLPEDLWQIVTGSGSVVGS
ALVDNVDFICFTGSTATGRAVAERAARRLIGASLELGGKNPLVVREDADVEAAVAGTIPA
AFANSGQMCIHVERVYVHEKVYGAYRDALVRATSALRLGQGYDYASDLGSLVSPAQLASV
EAHVGDAVAKGATVLAGGKARPDVGPLCYEPTVLEGVTRDMAVHGEETFGPVLSLYPFRT
DDEAVALANQGTYGLSASIWSRDSRTAERMALRIRSGSVNVNDGAMAAAGSIEAGMGGMG
ESGLGRRHGAEGIRKYTESQTIAEQRLMPLGPSPKAPVADFIRSTNRQLALLKRFRVR

NT seq 1617 nt +upstreamnt +downstreamnt
atgagcacggagcagagccgggtctcggagcacgcggcgacgggcgagcgccccgcctgg
gtcaccgacgaggtggtcgcccggtggtgcgagcgggtgcgcagggacgtgacccggcgg
ggcggcggcgcgcccgacccggtcgtcgccaccgcgccctacgacctggcgccggtggcc
accgtcccggcctgcgcgcccgaggacgtcgcgtccgccgtcgtcaccgcccgcgacgcc
cagcgcgcgtggggcaagtcctcgttcgcgctgcgcgccgaggtcgtcctggccttccac
gacctgctgctggcgcgccaggaccaggtgctcgacctgatccagtgggagaccggcaag
gcccgctaccacgcctggcaggaggtcgcccaggtcgccacgatcgcccgccactacgcg
cgccgcgccaggcactacctcgcgcccaagcgggtgcgcggcatggtgcccgtgctgacc
aaggtcagggaggtgcgcgtgcccaagggcgtcgtcggggtcatctcgccgtggaactac
ccgctgtacctgggcgtcggcgacgtgctcccggcgctgatggcgggcaacgcggtggtc
tccaaggccgactcgcagaccgcgctcaccctgctgtggacgcgcctgctgatggccgag
gcgggccttcccgaggacctgtggcagatcgtcaccggctccggctcggtggtggggtcc
gcgctggtcgacaacgtcgacttcatctgcttcaccggctccaccgcgaccggccgcgcg
gtcgccgagcgggccgcgcgcaggctcatcggcgcgtcgctggagctgggcggcaagaac
ccgctcgtggtgcgcgaggacgccgacgtggaggccgccgtggcgggcaccattccggcc
gccttcgccaacagcgggcagatgtgcatccacgtcgagcgcgtctacgtgcacgagaag
gtctacggcgcctaccgcgacgccctcgtgcgcgcgacgagcgcgctccgcctcggccag
ggctacgactacgcctcggacctcggctcgctcgtctcacccgcccagctcgcgtccgtc
gaggcgcacgtgggcgacgcggtggccaagggcgcgaccgtgctggcgggcgggaaggcg
cggccggacgtcgggccgctgtgctacgagccgaccgtgctggagggcgtcacccgcgac
atggccgtgcacggcgaggagacgttcgggccggtgctctcgctctacccgttccgcacc
gacgacgaggccgtcgcgctcgccaaccaggggacctacgggctgtccgcgtcgatctgg
tcgcgcgacagccgcacggccgagcggatggcgctgcgcatccggtccgggtcggtgaac
gtcaacgacggcgcgatggcggcggcgggcagcatcgaggcgggcatgggcggcatgggg
gagagcggactcggcaggcggcacggcgccgagggcatccgcaagtacaccgagagccag
accatcgccgagcagcggctcatgccgctcgggccgtcgccgaaggcgcccgtggccgac
ttcatccgcagcaccaaccggcagctggcgctgctgaagcggttccgggtgcgctga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-AMI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (25)   

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