KEGG   Actinosynnema mirum: Amir_5962Help
Entry
Amir_5962         CDS       T00957                                 

Definition
(GenBank) formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
  KO
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ami  Actinosynnema mirum
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ami00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    Amir_5962
Enzymes [BR:ami01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Amir_5962
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Amir_5962
DNA repair and recombination proteins [BR:ami03400]
 Prokaryotic Type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Amir_5962
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
JGI: 
UniProt: 
Position
complement(7008410..7009285)
Genome map
AA seq 291 aa AA seqDB search
MPELPEVEVVRRGLHEHVTGRTVASVEVLHARAIRRHLPGAADFAVRLTGQRMDAARRRG
KYLWVDLSGGEAVLAHLGMSGQMLVQPVGAPDEKHLRVRVVFEDDGPELRFVDQRTFGGL
ALDELVEVDGTWLPRQVSHIARDPMDPEFDADAAVRALRSRKTDVKRALLDQTLVSGVGN
IYADESLWRARLHGLRPTAKLTTAKTAELLGHATQVMLEALGQGGTSFDALYVNVNGQSG
YFDRSLAVYGQEDRPCARCGTAIVREPFMNRSSYSCPRCQPRPRDAKTVAR
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
gtgcccgagctgcccgaggtcgaagtagtccgccgagggctgcacgagcacgtcaccggc
cgcaccgtcgcctccgtcgaggtgctgcacgcccgagcgatccgccgtcacctccctggg
gcggcggatttcgccgttcggctgaccggtcagcgcatggacgcggcgcgcaggcgcggc
aagtacctgtgggtcgacctgtccggcggcgaggcggtgctcgcgcacctcgggatgagc
gggcagatgctcgtccagccggtcggggcgcccgacgagaagcacctgcgggtccgggtc
gtgttcgaggacgatggcccggagctgcggttcgtggaccagcggacgttcggcgggctc
gcgctggacgagctggtggaggtcgacgggacctggttgccccggcaggtctcgcacatc
gcccgcgatccgatggacccggagttcgacgccgacgcggccgtgcgggcgctgcggtcg
cggaagacggacgtgaagcgggcgctgctcgaccagacgctcgtgtccggggtcgggaac
atctacgccgacgagtcgttgtggcgcgcccggctgcacgggttgcggcccacggccaag
ctgaccaccgccaagaccgccgagctgctcgggcacgccacgcaggtgatgctggaggcg
ctcgggcagggcgggacgtcgttcgacgcgctgtacgtcaacgtgaacgggcagtcgggg
tacttcgaccggtcgctcgcggtgtacgggcaggaggaccggccgtgcgcgcggtgcggg
acggcgatcgtgcgggagccgttcatgaaccggtcctcgtactcgtgcccccggtgccag
ccccggcctagggacgccaagaccgtcgcccgttag

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