KEGG   Advenella mimigardefordensis: MIM_c19220
Entry
MIM_c19220        CDS       T03016                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoamide dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
amim  Advenella mimigardefordensis
Pathway
amim00010  Glycolysis / Gluconeogenesis
amim00020  Citrate cycle (TCA cycle)
amim00260  Glycine, serine and threonine metabolism
amim00280  Valine, leucine and isoleucine degradation
amim00310  Lysine degradation
amim00380  Tryptophan metabolism
amim00620  Pyruvate metabolism
amim00630  Glyoxylate and dicarboxylate metabolism
amim00640  Propanoate metabolism
amim00785  Lipoic acid metabolism
amim01100  Metabolic pathways
amim01110  Biosynthesis of secondary metabolites
amim01120  Microbial metabolism in diverse environments
amim01200  Carbon metabolism
amim01210  2-Oxocarboxylic acid metabolism
amim01240  Biosynthesis of cofactors
Module
amim_M00009  Citrate cycle (TCA cycle, Krebs cycle)
amim_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amim_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
amim_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:amim00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    MIM_c19220 (lpdA)
   00020 Citrate cycle (TCA cycle)
    MIM_c19220 (lpdA)
   00620 Pyruvate metabolism
    MIM_c19220 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    MIM_c19220 (lpdA)
   00640 Propanoate metabolism
    MIM_c19220 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MIM_c19220 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    MIM_c19220 (lpdA)
   00310 Lysine degradation
    MIM_c19220 (lpdA)
   00380 Tryptophan metabolism
    MIM_c19220 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    MIM_c19220 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amim04147]
    MIM_c19220 (lpdA)
Enzymes [BR:amim01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     MIM_c19220 (lpdA)
Exosome [BR:amim04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   MIM_c19220 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored Biotin_lipoyl_2 GIDA FAD_binding_2 NAD_binding_8 Thi4 AlaDh_PNT_C GCV_H DAO FAD_binding_3 HI0933_like PYNP_C Lycopene_cycl RnfC_N
Other DBs
NCBI-ProteinID: AHG64002
UniProt: W0PEP5
Position
2197076..2198917
AA seq 613 aa
MSQVEIKVPDIGDFDAVEVIEVLVAQGDTVKEEQSLITVESDKASMEIPSSAAGKVVSLS
VKVGDKVSEGTVILMLEAAAAGAQAAASDKAAAQPAAKSEAAAQKPAASSAAAEQASAAA
DQRPAQAAADSSEVRYSPPASAPADGCDVLVLGAGPGGYSAAFRAADLGLSVVLVERYAT
LGGVCLNVGCIPSKALLHSVAVLEEAKHLSENGITFGEPAIDLDKLRASKDKVVSTLTGG
LTGMAKARKVKVIQGLGQFADEYHLTVQKDDGSSETVAFKHAIIAAGSQSVKLPFLPEDE
RIIDSTGALKLKSIPKKMLIIGGGIIGLEMGTVYSALGARLDVVEMLDGLMQGADRDLVK
VWQKKNEGRFDQIMVKTKTVSAEAKPDGIWVKFEGEAAPAEPQRYDLVLQAVGRSPNGAK
IGADKAGVQVTERGFINVDEQMRTNVPHIFAIGDIVGQPMLAHKAVHEAHVAAEVIAGHK
SYFDVRVIPSVAYTDPEVAWAGLTEEEAKKQGIKFEKGVFPWAASGRAIANGRSEGFTKL
LFDAETHRIIGGSIVGTHAGDLISEVALAVEMGADSVDIGKTIHPHPTLGESVGMAAEVA
HGTCTDLPPVKRK
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgagtcaagtagaaatcaaggtgcccgatattggtgacttcgatgcagtcgaagttatc
gaagtattggttgcacaaggcgatacggttaaggaagaacagagcctgattaccgttgag
tcggacaaggcttcaatggagatcccttcttcggctgccggtaaagtggtgtccctttct
gtcaaagtaggtgacaaggtgtcagaaggcacggtcattctgatgcttgaagcggccgct
gccggagcgcaagcggctgccagcgataaagcagcggcccagcctgctgctaaaagcgag
gcggcggctcagaaacccgcagccagcagtgctgctgcggagcaagccagtgctgccgca
gaccagcggccggcgcaagcggctgccgacagcagcgaggttcggtattcgcctccggct
tcggcacccgcagacggctgcgacgtactggtgctgggcgccggccctggcggttattct
gcagctttccgtgctgctgatctgggtttaagtgtggtgctggttgaacgctatgccaca
ctgggcggggtctgcctgaatgtgggatgtattccttccaaagcgctgctgcacagtgtt
gccgtattggaagaagccaaacatctgtcggaaaatggcattacttttggtgagccagcc
attgatctggacaagttgcgtgcaagcaaagacaaggtggtttccacgctgaccggcggc
ctgaccggtatggccaaggcccgcaaggttaaggtgattcagggtctggggcagtttgcc
gacgaataccatctgactgtacagaaagatgacggctcaagcgaaacggttgcgttcaag
catgccattattgctgcgggcagtcagtctgtgaaactgccattcctgcctgaagacgag
cgcattattgattccaccggtgctttgaaactgaaaagcatcccgaaaaaaatgctgatc
atcggtggcggcattatcggcctggaaatgggcaccgtctattcggctctgggcgcacgc
ctggacgtcgtggagatgctcgatggcctgatgcagggcgcagatcgcgatctggtcaag
gtatggcaaaagaaaaacgaaggccggtttgatcaaatcatggtcaaaaccaaaacggtg
tcggccgaggccaagcctgacggtatctgggtcaaattcgaaggcgaagccgctccggcc
gaaccgcagcgatacgatctggtgttgcaggcggtagggcgttctcccaacggtgcaaag
atcggtgccgacaaggccggtgttcaggtaaccgaacgtggcttcattaatgtcgatgaa
cagatgcgcaccaatgtgccgcatattttcgccatcggcgatattgttgggcaacccatg
ctggcgcacaaagccgttcatgaagcgcatgtggccgctgaagtgatcgccgggcacaag
agttattttgatgtacgcgtgattccttctgttgcctataccgatccggaagtggcctgg
gcagggctgaccgaagaagaagccaaaaagcagggcatcaagttcgaaaaaggcgtgttc
ccatgggccgcctcaggacgtgccattgccaacggtcgctcggaaggcttcaccaagctg
ctgtttgatgccgaaacgcatcgcattattggtggtagcattgtaggtacccatgccggt
gacctgatctctgaagtggcgctggccgtggaaatgggcgccgattcggttgatatcggc
aagactattcatccgcatccaacgcttggcgaatcagtggggatggcggctgaagtggcc
catggtacctgcaccgatctgcctccggtcaaacgcaagtag

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