KEGG   Aurantimicrobium minutum: AUMI_110410
Entry
AUMI_110410       CDS       T05175                                 
Name
(GenBank) DnaJ-like protein
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
amin  Aurantimicrobium minutum
Pathway
amin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    AUMI_110410
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amin03019]
    AUMI_110410
   03110 Chaperones and folding catalysts [BR:amin03110]
    AUMI_110410
   03029 Mitochondrial biogenesis [BR:amin03029]
    AUMI_110410
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amin04147]
    AUMI_110410
Enzymes [BR:amin01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     AUMI_110410
Messenger RNA biogenesis [BR:amin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     AUMI_110410
Chaperones and folding catalysts [BR:amin03110]
 Heat shock proteins
  HSP60 / Chaperonin
   AUMI_110410
Mitochondrial biogenesis [BR:amin03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    AUMI_110410
Exosome [BR:amin04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   AUMI_110410
  Exosomal proteins of other body fluids (saliva and urine)
   AUMI_110410
  Exosomal proteins of breast cancer cells
   AUMI_110410
  Exosomal proteins of colorectal cancer cells
   AUMI_110410
  Exosomal proteins of bladder cancer cells
   AUMI_110410
SSDB
Motif
Pfam: Cpn60_TCP1 CbiA
Other DBs
NCBI-ProteinID: BAU99583
UniProt: A0A173LXJ4
Position
sequence1:complement(1098219..1099838)
AA seq 539 aa
MAKLIAFDEEARRGLERGLNILADTVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE
LDDPFEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVREGLRNVAAGADPISLKRGIE
KAVAAVSEELINNAKEVETKEEIAATASISAADPEIGALIAEAIDKVGKEGVVTVEESNA
FGTELELTEGMRFDKGYLSAYFVTDPERQEAVFEDPYILIVNSKVSNIKDLLPIVDKVIQ
TGKQLLIIAEDVDGEALATLVVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIA
EEVGLKLENVELDMLGKARKVVITKDETTIVEGAGDADQIAGRVAQIRAEIDNTDSDYDR
EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVPGGGVALIQA
GKTAFEKLSLTGDEATGANIVRVAIEAPLRQIALNAGHEPGVVVDKVRSLNIGWGLNAAT
DEYVDLLSAGIIDPAKVTRSALQNAASIAALFLTTEAVVAEKPEKAAPPMGDPSGGMDF
NT seq 1620 nt   +upstreamnt  +downstreamnt
atggcaaaactaattgcttttgatgaagaggcacgtcgcggtctagagcgcggtctgaac
atcctcgctgacaccgtcaaggtcacccttggcccacgtggacgcaatgtcgtcctcgag
aagaagtggggcgcccccacgattactaacgatggtgtgtccatcgctaaggaaatcgaa
ctggacgaccccttcgaaaagatcggcgccgagctggtcaaggaagttgctaagaagacc
gatgacgttgctggtgacggaaccaccaccgcaaccgttctcgctcaggcactcgttcgc
gaaggacttcgcaacgttgctgctggcgcagaccccatctcgctcaagcgcggtatcgag
aaggctgttgcagctgtttccgaggaactaatcaacaacgctaaagaggttgagaccaag
gaagagatcgctgctaccgcttctatctctgcagctgaccccgagatcggtgcactgatt
gctgaagctatcgacaaggttggtaaggaaggtgtggtcaccgttgaggagtccaacgct
ttcggaaccgagctcgagctcaccgaaggtatgcgcttcgacaagggttacctctccgca
tacttcgtcaccgacccagagcgtcaggaagcagtcttcgaagacccttacatcctgatt
gtcaacagcaaggtttccaacatcaaggacctgctgcccatcgtggacaaggttattcag
actggtaagcagctgctcatcatcgctgaagacgttgacggtgaagcattggcaactctg
gttgtcaacaagattcgtggcatcttcaagtctgtagctgtcaaggctccaggctttggt
gaccgccgcaaggccatgcttcaggacatcgccatcctcaccggtggtcaggttatcgct
gaagaggtcggcctcaagctcgagaacgttgaactcgacatgttgggtaaggctcgcaag
gttgttatcaccaaggacgagaccaccatcgttgagggtgctggagacgcagaccagatc
gctggccgcgtagctcagatccgcgccgagattgacaacaccgattccgactacgaccgc
gagaagctccaggagcgcctggctaagctcgccggtggtgttgcagtaatcaaggcaggt
gctgctaccgaggttgaactcaaggagcgcaagcaccgcattgaggacgctgtccgcaac
gcgaaggctgctgttgaagagggtattgtccccggtggtggtgttgcactgatccaggct
ggcaagactgctttcgagaagctctcactgaccggtgacgaagcaaccggtgcgaacatt
gttcgcgtcgctatcgaagcaccacttcgccagattgctctcaacgcaggacacgagccc
ggcgttgtcgtcgacaaggttcgctcactcaacatcggctggggcctcaacgccgcaacc
gacgagtacgttgacctgctctctgctggcatcatcgaccctgcgaaggtaacccgctct
gctctgcagaacgccgcatctatcgcagcactgttcctcaccactgaggcagtagtcgct
gagaagccagagaaggctgctccacctatgggtgacccctccggtggaatggacttctaa

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (21)   

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