KEGG   Alligator mississippiensis (American alligator): 102557634
Entry
102557634         CDS       T03087                                 
Symbol
TRPC1
Name
(RefSeq) transient receptor potential cation channel subfamily C member 1
  KO
K04964  transient receptor potential cation channel subfamily C member 1
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    102557634 (TRPC1)
Ion channels [BR:amj04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   102557634 (TRPC1)
SSDB
Motif
Pfam: TRP_2 Ion_trans Ank_2 Ank_4 Dsc3_C MTR4-like_stalk
Other DBs
NCBI-GeneID: 102557634
NCBI-ProteinID: XP_006263376
Position
Un
AA seq 781 aa
MAALYQSADPSASASPNKLLALKDVRHVKEETTLDEKLFLLACDKGDYYMVKRLLEENSS
GEMNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSSDALLVAIDSEVVGAVDILLNH
RPKRSSRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDISLPKPHAVG
CECTLCTAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLVEV
EFRNDYEELAQQCKTFAKDLLAQARNSRELEVILNHTSSDEHIDKRGLLEERMNLSRLKL
AIKYNQKEFVAQSNCQQFLNTVWFGQMAGYRRKHTCKKILTVLTVGFFWPVLSLCYLLAP
KSRVGQIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEAKKNTMGPALERIDYLLIIWLI
GMVWSDVKRLWYDGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHGFGERIKWDAF
HPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGKFLGMFLLVLFSFT
IGLTQLYDKGFAVSNDKDCTGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTRFS
YGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLSYF
DDKCTLPPPFNVIPSPKTICYLFNSLSKWICSHTSSGKVKRQNSLKEWRNLKQKRDENYQ
KVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEMRDLLGFRTSKYAMFYPR
N
NT seq 2346 nt   +upstreamnt  +downstreamnt
atggccgcgctgtaccagagcgccgacccctcggcctcggcctcccccaacaagctgctg
gcgctgaaggacgtgcggcatgtgaaggaggaaaccaccctggacgagaagctcttcctg
ctcgcctgcgacaaaggtgattattacatggttaagagactgttggaagagaacagctcc
ggtgaaatgaacataaattgcgtggatgtgcttgggagaaacgctgttaccataaccatt
gagaatgaaaatttggacatactccagcttcttttggattatggctgccagtcatcagat
gcacttttggttgctattgactcggaagtagtgggagctgttgatatactacttaatcat
cgaccaaaacgatcttcaagaccaactattgtaaaactaatggaacgtattcagaaccca
gagtattcaacaaccatggatgtggcacctgtcattttagctgctcatcgaaacaactat
gagatccttacaatgctattgaaacaggatatatcattacccaaacctcatgctgtgggc
tgcgaatgcacactgtgtactgcaaaaaataagaaagatagtctacggcactccaggttt
cgtcttgacatctataggtgtttggccagtccggctttaataatgttaacagaggaggat
cctatcctaagagcttttgaacttagtgcagacttaaaagaattaagtcttgttgaagtt
gaattcagaaatgattatgaggagttagcccagcagtgcaaaacctttgctaaagacttg
cttgcccaggcacgaaactcacgtgagcttgaagttattctaaaccacacatctagtgat
gagcatatagataaacgaggattgttagaagagaggatgaatttgagtcgcttaaagctt
gccatcaagtataatcaaaaggaatttgttgcccagtctaactgtcagcagtttctcaat
actgtatggtttggacagatggcaggctaccgacgcaaacacacttgtaagaagattttg
actgttttgacagttggctttttttggccagtgctgtccctctgttacttgttagctcca
aaatcacgagtaggtcaaataattcacactccttttatgaagtttattattcatggagct
tcatatttcacgttcctgttgttgcttaacttgtactcacttgtctataatgaagctaag
aagaacacaatggggccagcacttgagagaatagattatcttctgataatatggcttatt
ggaatggtgtggtcagacgttaaaagactctggtatgatggcttagaagacttcttagaa
gaatctcgtaatcaactaagttttgtcatgaattctctgtatctggcaacctttgctctc
aaagttgttgctcataacaagttccatggatttggtgagaggataaagtgggacgcattc
catcctacacttgtggcagaaggtctctttgcttttgctaatgttctcagttaccttcga
ctcttcttcatgtataccaccagctctatcctagggccactgcagatttcaatgggtcag
atgctacaagattttggaaaattcttagggatgttccttcttgtcttgttctcattcaca
attggattgacccaactgtatgataaaggatttgctgtcagcaacgacaaggactgtacc
gggatcttctgtgagcagcaaagcaatgacacatttcattcgtttattggcacctgcttc
gctctgttctggtacatattctctctagcacatgtagcaatctttgtcactagatttagc
tatggtgaagagttgcaatcttttgtgggggctgtaattgttgggacctacaacgtagtg
gttgtgattgtccttaccaagcttctagtggcaatgcttcataaaagttttcagcttata
gcaaatcatgaagataaagagtggaaattcgctcgtgccaaactttggcttagttacttt
gatgacaaatgcacactgcctccacctttcaatgtcattccttcgcccaagaccatctgc
tatctctttaacagcctcagtaaatggatctgctctcatacgtcaagtggcaaagtaaaa
cgtcagaatagtctgaaggaatggagaaatttgaagcaaaagagggatgagaattaccaa
aaggtgatgtgttgtttagtccatcgttacttgacctccatgaggcagaagatgcaaagc
acagatcaggcaactgtggaaaatttgaatgaactacggcaagatttatcaaaatttcga
aatgaaatgagggacctacttggttttaggacctcgaaatatgctatgttttatccaaga
aactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (6)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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