KEGG   Alligator mississippiensis (American alligator): 102559241
Entry
102559241         CDS       T03087                                 
Name
(RefSeq) alpha-actinin-3
  KO
K21073  actinin alpha 2/3
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102559241
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    102559241
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amj04812]
    102559241
   04147 Exosome [BR:amj04147]
    102559241
Membrane trafficking [BR:amj04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    102559241
Cytoskeleton proteins [BR:amj04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     102559241
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   102559241
  Exosomal proteins of colorectal cancer cells
   102559241
  Exosomal proteins of bladder cancer cells
   102559241
SSDB
Motif
Pfam: Spectrin CH EFhand_Ca_insen EF-hand_1 EF-hand_6 EF-hand_7 EF-hand_8 PRP9_N CAMSAP_CH Raco_middle XisI AIF-1
Other DBs
NCBI-GeneID: 102559241
NCBI-ProteinID: XP_014462963
Position
Un
AA seq 860 aa
RAPTEWALPDPPPAPQTFTAWCNSHLRKAGTQIENIEDDFRNGLKLMLLLEVISGPCRPC
NTRVQLHARVXPLHGFYSPAHLXSPHPGPPEIVDGNLKMTLGMIWTIILRFAIQDISVEG
EHTRPGVVCAHVCMCTWGSRVSSPSWKDGLALCALIHRHRPDLIDYAKLRKDDPIGNLNT
AFEVAEKYLDIPKMLDAEDIVNTPKPDEKAIMTYVSCFYHAFAGAEQAETAANRICKVLA
VNQENEKLMEEYEKLASELLEWIRRTIPWLENRVAEKSMSAMRRKLEDFRDYRRVHKPPR
VQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDIANAWKGLEQVEKGYEEWLLTEIR
RLERLDHLAEKFKQKATLHETWTRGKEEALTLRDYEAASLYEVRALLRRHEAFESDLAAH
QDRVEQIAAIAQELNELDYHDAASVNSRCQAICDQWDTLGTLTQKRRDALERVEKLLETI
DQLYLEFAKRAAPFNNWLDGASEDLQDMFIVHSIEEIQTLITAHEQFKATLPEADKERAA
IAGIQAEVQKIAQTYGIKLSAGNPYSALSHLDIASKWDTVKQLVPHRDQTLQEELARQQA
NERLRRQFAAQANIIGPWIQTKMEEIGHVSADISGSLEDQMNHLKQHEQNIINYKTNIDK
LEGDHQLIQEALVFDNKHTSYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKGISQEQ
MNEFRASFNHFDRKRNGMMDPDDFRACLISMGYDLGEVEFARIMTLVDPNNTGVVTFQAF
IDFMTRETAETDTAEQVMASFKILASDKNYITVEELRRELPPEQAEYCITRMTKYVGADS
VSGALDYVSFSNALYGESDL
NT seq 2583 nt   +upstreamnt  +downstreamnt
cgagcccccactgaatgggccctgcctgaccctccccccgccccgcagacattcacggcc
tggtgcaactcgcacctgcgcaaggcgggcacccagatcgagaacatcgaggacgacttc
cgcaatggcctcaagctcatgctgctgctggaggtcatctcaggtccgtgcaggccatgc
aacacgcgtgtgcagctacatgcacgtgtctgacccctgcatggcttctactcacctgca
catctctgatccccccatcctggccccccagagatcgtggacgggaacctgaagatgacc
ctgggcatgatctggacgatcatcctgcgcttcgccatccaggacatctccgtcgagggt
gagcacacacgtcccggggttgtgtgtgcacacgtgtgcatgtgcacgtggggctcacgg
gtgtcttcccccagctggaaggacgggctggccctgtgcgccctcatccaccgccaccgc
cccgacctcatcgactacgccaagctcagaaaggacgaccccatcgggaacctcaacacg
gccttcgaggtggctgagaaatacctggacatccccaagatgctggacgccgaagacatc
gtcaacacgcccaagccggacgagaaggccatcatgacctacgtgtcctgcttctaccac
gccttcgccggggccgagcaggccgagacggcggccaacaggatctgcaaggtgctggcc
gtcaaccaggagaacgagaagctgatggaggagtacgagaagctcgccagcgagctgctg
gagtggatccgccgcaccatcccgtggctggagaaccgcgtggccgagaagagcatgagc
gccatgcgccggaagctggaggacttccgcgactaccgccgcgtgcacaagcccccgcgc
gtgcaggagaaatgccagctcgagatcaacttcaacacgctccagaccaagctgcgcctc
agcaaccgccccgccttcatgccctccgagggcaagatggtctcggacatcgcgaacgcc
tggaaggggctggagcaggtggagaagggctacgaggagtggctgctcaccgagatccgc
cgcctcgagcgcctcgaccacctggccgagaagttcaagcagaaagccaccctgcacgag
acctggaccagagggaaggaggaggcgctgacgctgcgggactacgaggccgcgtcgctg
tacgaggtccgggccctgctgcggcgccacgaggcctttgagagcgacctggcggctcac
caggaccgcgtggagcagatcgcagccatcgcccaggagctgaacgagctggactaccac
gacgcagcctcggtgaactcccgctgtcaggccatctgcgaccagtgggacacgctgggg
accctcacccagaagcgccgcgatgccctcgagcgggtggaaaagctgctggagacgatc
gaccagctgtacctggagttcgccaagcgcgccgcccccttcaacaactggctggacggc
gccagcgaggacctgcaggacatgttcatcgtgcacagcatcgaggagatccagaccctg
atcacggcgcacgagcagttcaaggcgacgctgcccgaggccgacaaggagcgcgcggcc
atcgccggtatccaggccgaggtgcagaagatcgcgcagacgtacggcatcaagctcagc
gccggcaacccctacagcgccctgtcccacctcgacatcgcctccaagtgggacacggtg
aagcagctggtgccgcaccgcgaccagacgctgcaggaggagctggcgcggcagcaagcc
aacgagcgcctccgccgccagttcgctgcccaggccaacatcatcgggccctggatccag
accaagatggaggagatcggccacgtctcggcagacatcagcgggtccctggaggaccag
atgaaccacctgaagcagcacgagcagaacatcatcaactacaagaccaacatcgacaag
ctggagggcgaccaccagctcatccaggaggcgctggtcttcgacaacaagcacaccagc
tacaccatggagcacatccgggtgggctgggagcagctgctgaccaccatcgcgcggacc
atcaacgaggtggagaaccagatcctgacgcgcgacgccaagggcatcagccaggagcag
atgaacgagttccgggcctccttcaaccacttcgaccggaagcggaacgggatgatggac
cccgatgacttccgcgcctgcctcatttccatgggctacgacctgggcgaggtggagttc
gcccgcatcatgacgctggtggaccccaacaacacgggggtcgtgaccttccaggcgttc
atcgacttcatgacccgggagacggctgagaccgacacggccgaacaggtcatggcctcc
ttcaagatcctcgcctctgacaagaactacatcacagtggaggagctgcggcgtgagctg
cccccagagcaggccgagtactgcatcacccgcatgacgaagtacgtgggggccgactcc
gtgtctggggccctcgactacgtctccttctccaacgcgctctacggcgagagcgacctg
taa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (12)   
   Pfam (12)   
All databases (24)   

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