KEGG   Alligator mississippiensis (American alligator): 102559323
Entry
102559323         CDS       T03087                                 
Symbol
CACNB1
Name
(RefSeq) calcium voltage-gated channel auxiliary subunit beta 1
  KO
K04862  voltage-dependent calcium channel beta-1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04010  MAPK signaling pathway
amj04260  Cardiac muscle contraction
amj04261  Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    102559323 (CACNB1)
 09150 Organismal Systems
  09153 Circulatory system
   04260 Cardiac muscle contraction
    102559323 (CACNB1)
   04261 Adrenergic signaling in cardiomyocytes
    102559323 (CACNB1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:amj04040]
    102559323 (CACNB1)
Ion channels [BR:amj04040]
 Voltage-gated cation channels
  Calcium channel, voltage-gated (Cav)
   102559323 (CACNB1)
SSDB
Motif
Pfam: Guanylate_kin VGCC_beta4Aa_N SH3_1 SH3_2
Other DBs
NCBI-GeneID: 102559323
NCBI-ProteinID: XP_006275044
UniProt: A0A151P6C5
Position
Un
AA seq 646 aa
MVQDGSMSRTPCSSSQDIQMDVFDHPGLQGKYGKRKSRFKRSDGSTSSDTTSNSFVRQGS
AESYTSRPSDSDVSLEEDREALHKEAERQALAQLEKAKTKPVAFAVRTNVGYNPSPNDDM
PVQGMAISFEPKDFLHIKEKYNNDWWIGRLVKEGCEVGFIPSPVKLENMRMLQEQKMRQN
RLSSSKSGDNSSSSLGDVVTGTRRPTPPASGTLDMTNLAYDPDALDLEDEEAEGLENHRS
PKTSVSSVTTPPSNVKRIPFFKKAEHVPPYDVVPSMRPIILVGPSLKGYEVTDMMQKALF
DFLKHRFDGRISITRVTADISLAKRSVLNNPSKHTIIERSSTRSSLAEVQSEIERIFELA
RTLQLVALDADTINHPAQLAKTSLAPIIVYIKITSPKVLQRLVKSRGKSQAKHLNVQMVA
SDKLAQCPPEMFDIILDENQLEDACEHLSEYLEAYWKATHPPSSNPPNPLLNRTMATAAL
AASPAPVSNLQGPYLVHGEQTREGERASLHDYPGEPATRSQGRPGQLHARLVNRGLSRQD
TFDSETQGSRDSAYTEPGDSCMDMETDPYEEPEAEPRSTPGAYHRGLGRHHLHLHQSSWD
EDEPDRENHNRQPRGKGRDHYCQNEEEAMGMNKNDMEAWGRDVYIR
NT seq 1941 nt   +upstreamnt  +downstreamnt
atggtgcaggacggcagcatgtccaggacgccgtgcagctccagccaggacatccagatg
gacgtgttcgaccacccgggcctgcaggggaaatacggcaagcggaagagtcgtttcaaa
cgctcggatggcagcacctcctcggacacaacttccaacagcttcgtgagacagggctct
gcggagtcctacaccagccgtccctcagactcggatgtgtccctggaggaggatcgtgaa
gctttgcacaaggaggctgagcgccaggccctggcacaactggagaaggccaagaccaag
ccagtagcatttgcagtgaggacaaatgtaggctacaacccatcccctaatgatgacatg
ccagtccagggtatggccatctcctttgaacccaaagacttcctgcatatcaaagagaaa
tataacaacgactggtggatcgggcgcctggtgaaggagggctgtgaggtgggcttcatc
cccagccctgtcaaactggaaaacatgaggatgctgcaggagcaaaagatgaggcaaaac
cgcctcagttcaagcaaatcaggggacaactccagctccagcctgggagatgtggtgacg
gggacccgcagacccaccccacctgccagcggtactctggacatgactaacttagcttat
gaccctgatgcccttgacttagaagatgaggaggccgaaggcctggagaaccaccgctcc
cctaagactagcgttagcagtgtcaccacacccccctccaacgtcaagcgcatccccttc
tttaagaaggcggagcacgtgcctccctatgatgtggtaccctccatgcggccaatcata
cttgtggggccgtctttgaaggggtacgaggtgacagacatgatgcagaaagctcttttt
gacttcctgaagcatcgctttgatggcaggatctccatcacgcgggtgacagccgacatc
tccctggccaagcgctctgtgctgaataaccccagcaaacacaccatcatcgaacgctcc
agcacgcgctccagcctggctgaggtgcagagtgagattgagcgcattttcgaactggcc
cggaccctgcagcttgtggctcttgatgcggacaccatcaaccacccagcccagctagcc
aagacctcactggcccccatcattgtgtacatcaagatcacctcccctaaggtgctccag
agactggtcaagtcccggggaaagtcccaggccaaacacctgaatgtgcagatggtggca
tcagacaaactggcacagtgccctccggaaatgtttgacatcatcctggatgagaaccaa
ttggaagatgcctgtgagcacctgtctgagtacctggaagcctattggaaggccacgcat
ccacccagcagcaacccacccaatcccctcctgaaccgcaccatggctactgctgcccta
gctgccagtcccgcccctgtctccaacctccagggcccctacctagtgcatggggagcag
acgcgtgagggggagcgtgctagccttcatgactacccaggagagccggccacccgcagc
caggggcgtccaggccagctccatgctcgcctagtcaaccgtggcctatcacgccaggac
accttcgactcagagacccagggcagccgtgactcggcctacacagagccgggcgattcc
tgcatggacatggagacggacccctatgaggagcccgaagctgagccacgcagcacccct
ggtgcctaccaccgagggctgggccgccaccacctccacctgcaccagagctcctgggat
gaggatgagccagatcgggagaaccacaaccggcaacctcggggcaaggggcgagaccac
tactgccagaacgaggaggaggccatgggcatgaacaagaatgacatggaggcctggggg
cgggacgtgtacatccgctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (4)   
   Pfam (4)   
All databases (21)   

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