KEGG   Alligator mississippiensis (American alligator): 102568287
Entry
102568287         CDS       T03087                                 
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA decapping 4
  KO
K12616  enhancer of mRNA-decapping protein 4
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    102568287 (EDC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amj03019]
    102568287 (EDC4)
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102568287 (EDC4)
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     102568287 (EDC4)
SSDB
Motif
Pfam: Ge1_WD40 EDC4_C WD40 Uteroglobin ApoLp-III
Other DBs
NCBI-GeneID: 102568287
NCBI-ProteinID: XP_014454759
Position
Un
AA seq 1403 aa
MASASIDIEDATQHLRDILKLDRPGGSVNENQRPSSSYNGDLNGLLVPDPITTGDGASLA
KPMHRSVPLGTLQEKQVICLSGDDSSTCLVISAKDVEIVASSDSSITSKARGSNKVKIQP
VARYDWEQKYYYGNLIAVSNSYLAYAIRGATNGSAMVRVLSVSTAERTLLKGFTGSVADL
AFAHLNSNQLACLDEAGNLFVWRLAMVNGKIQEEILVNIKRPDGTPLNNFRRIIWCPFIP
DENEESSEEGSQILALLHEDRAEVWDLDIIRANDSSWPVEVTNIKEGFIVVKGHSTRLSE
GALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGKPLSCLLFCDNHKKQDP
EVPFWRFLITGADQNRELKMWCTVSWTCLQTVRFSSDIFSSMTVLPSLKVCLDLSAEYLI
LSDVQRKVLYVMELMQNQEEGKAYFSSISEFLLTHPVLSFGIQAVSRCRLRHTEVLLAEE
ENDSLSVEGAQGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPLHSPDMAASIPSHGSHE
DFAFPDHLADLGTEGLGSEKGSIHGSQSDLRRISDLPVPADFLSLSNDAKPKLMTPDAFM
TPSTSLQQITVSPGSSVSSLTAVTAMSSTSVNDAAMSSHRPSEDLTLNPKMQLDTSITLS
SSGSSLQTSPRNHSVLIPGLPDKLTAKAPVPVAPGNPPLSLELKEVEPLVVPQASPTRER
SPDVISSASTAMSQDIPEIASETLQRSFAAAPTGLPAEVLEPNHHADSMASAASALHLLS
PRNRHNSEHSHHSLDMAPVEVDRLNTPSLLETALTQENASSDSVVSQPWPAAPDITRETR
NSMADSPRDEVEEKHKSSSYHRHSYHLLQHDSQDASAEQSDHDDEVASLASTSGGFGAKV
SAQRLPVKDWKAKASPRASPKLKRKGKKEDGDVTQSPRSSDHQVTPEYQDELMSLLRNQQ
RELTELRQNQMELMRRLTDHLDAVQSSLMGHVERVVGSQQEQEQRRLDRALTEWQQRNEQ
LQDHLSQQLSQSMSTAVCNRLERTIREEMKKTVPQCISKSMDPVTGQLSNTIATKLTAVE
GTLKENVTKLVKSKNLTDTIARAAADALQGPIQSAYREAFQSIVLPAFEKSCQSMFQQIN
DTFKQGTQEYIQQLETHMKNKKVREQEARDPLLSQLRQLITTFQSTTEQLASTITASVHA
EVQHQLHIIVGNMQESILTQVQRVIKGEVSLAMKEQQAAVTSSIMQAMRSAAGTPIPSAH
LDFQSQQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPQQVFGQHPCPLSQPVL
LSLIQQLSSDLGTRTELKLSYLEEAVMHLDHSDPITRDHMGSVMSQVRQKLFQFLQAEPH
NSLGKAARRLMIMLQGLVTPSMT
NT seq 4212 nt   +upstreamnt  +downstreamnt
atggcctccgccagcatcgacatcgaggacgcgacccagcacctgcgcgacatcctcaag
ctggaccggcccggaggttcagtgaatgaaaatcagcgaccatccagttcatacaatggg
gacctgaacgggctgctggtgccagaccccatcacaactggagatggagcttcattggct
aagccaatgcaccgcagtgttcctctgggaaccctgcaggagaagcaagtcatctgcctt
tctggagatgacagctctacctgcctcgtgatatcagcgaaagatgtggagatagtagcc
agtagtgattccagcatcaccagtaaggccagagggagcaacaaggtaaaaatccaaccg
gttgccagatacgattgggagcagaaatactactatggaaacctgatagcagtctcaaac
tcttacctggcatatgccatccgaggtgccactaatggctccgccatggtgcgtgtgctg
agtgtcagcacagctgagcgaaccttgctgaaaggattcacgggtagtgtggcagacttg
gctttcgcccatctcaactccaatcagctagcttgcctggatgaggctggcaacctcttt
gtctggcgcctagccatggttaatgggaaaatccaagaggagatcctggtgaacattaaa
cgacctgatggtaccccgttgaacaactttcggaggatcatatggtgccccttcattcca
gatgagaatgaggaaagcagtgaagaggggagccaaatactggcgctgctgcatgaggac
agggcagaggtttgggatctggacataatccgagccaatgatagctcttggccagtggag
gtcaccaacatcaaagagggcttcattgtggtgaaaggccacagcacgcgtctaagtgag
ggagcgctctctccagatggaacagttttggccacagcaagtcatgacggctatgtcaaa
ttctggcagatctacattgaaggacaggatgagccaaggtgcctccatgaatggaagcct
catgatgggaagcctctttcctgtctgctcttctgtgacaatcataaaaaacaagaccca
gaggttcctttctggagatttctcatcacaggtgcagatcagaatcgggaactgaagatg
tggtgcactgtgtcttggacctgtctgcagactgtccggttttcctctgatatcttcagt
tccatgaccgttcttccaagtttgaaggtctgcctggacctctctgctgaatacctgata
ctgagtgatgtgcagagaaaggtcttgtatgtgatggagctgatgcagaaccaggaagaa
ggtaaagcctacttcagctccatttcagagttcctcctcacccacccagtcctgagcttc
ggcatccaggcagtgagtcgctgccggctaagacacactgaggtcctgctagctgaagag
gaaaatgactcccttagtgtagaaggggctcagggggctggggctgttgaatccgcagca
ggtgtgctgatcaagctcttctgtgtccacaccaaggcccttcaggatgtacagatccga
ttccagcctcttcatagcccagatatggctgcatcaataccctcccatggctcccatgaa
gattttgcatttccagaccacttggctgacctgggcacagaagggctgggatcagagaag
ggatccatacatggttcccagtctgacttacggcgcatttcagacctgcctgtgcctgca
gactttctctctctctcaaatgatgccaaacccaagctaatgaccccagatgcattcatg
accccgagcacatctcttcagcagatcaccgtgtcacctggtagcagtgttagttccctg
actgcagtcacagccatgagcagcacttctgtcaatgatgctgccatgtccagccatagg
ccatctgaagacctgaccttgaacccaaagatgcagttggataccagcatcacactgagc
agcagtggtagcagcctccagaccagtcccagaaaccattctgttcttatccctggactc
cctgacaaactgactgccaaggcacctgtcccggttgcacctggaaatccacctctctct
ctagagctgaaggaagtggagccccttgtggtaccccaggcttctcccacccgtgagcgc
tccccagatgtaatttcttcagcctccactgctatgtctcaagatatcccagagattgcc
tcggagaccctgcaacgcagctttgcagcagccccaactgggctccctgcagaggtactg
gagcccaaccaccatgcagacagcatggcgtcagctgcttcggccttgcacttgctgtct
ccaagaaacaggcacaattccgagcacagccaccactccctggacatggcgcctgtggag
gtggacagactgaacactccctcattgctggagactgctttaactcaggaaaatgcttct
tctgacagtgttgtgagccagccgtggccagcagctcctgacatcaccagagaaaccagg
aacagcatggcagacagccctagggacgaggttgaagagaagcacaagagctcttcctat
cacagacacagctaccacctgctacagcatgacagccaggatgccagtgcagagcaaagt
gaccatgatgatgaagttgcaagtttggcttctacatcaggcggatttggtgccaaagta
tctgcacagaggctgcctgtgaaggactggaaagccaaggcatcccctcgggcttcccca
aagctaaagcggaagggcaagaaagaggacggggatgtgactcagtccccacgatcatct
gatcaccaggtgactcccgagtatcaggatgagctgatgtctctgctgaggaaccaacag
agagagctcactgagctacggcagaaccagatggagctgatgcggagactcactgatcac
ctggacgctgtgcagagctccctcatgggccacgtggagagagtagttggctctcagcaa
gagcaagagcagaggaggctagaccgagctctgactgaatggcagcagcggaacgagcag
ttacaggatcacctgtcccaacagctctctcagtccatgtctaccgctgtctgtaatcgc
ctggagaggaccattcgtgaagagatgaagaagacagtgccccagtgtatttccaaaagc
atggaccctgtcactggacagctgagtaacaccattgcaaccaaactcacagctgttgag
ggcacattgaaggagaatgtcactaagctggtgaaatcaaagaaccttacagataccatt
gcgagggcagctgcggatgccctgcagggacccatccagtcagcctacagggaggcgttc
cagagcatcgtgctgcctgcatttgagaagagctgccagtccatgttccagcagatcaat
gacacgttcaagcagggcacacaggaatatatccaacagctggagacccacatgaagaac
aaaaaggtgcgagaacaggaggcacgggaccccctgctgagccagctccgacagctgatc
accaccttccagagcaccacagagcagctggcttccaccatcacggccagtgtccatgct
gaagtgcagcatcagctgcatatcatcgtgggcaacatgcaggagtccattctgactcag
gtgcagcgggtcatcaagggggaggtgagcctggccatgaaggagcagcaagcagctgtc
acctcaagcatcatgcaggcaatgcgctcagcagcgggcacgcccatcccctctgctcac
ctggacttccagtctcagcaggctcacatcctgcagctgctgcaacagggccacctcaac
caagctttccagcaggctctcactgctgctgatctgaatctggtcctgtatgtttgtgag
actgtagatccacagcaagttttcgggcagcatccatgtccactgtcccaacctgtcctc
ctctctctcattcagcagctctcctcagatttgggtacccggactgaactgaaactgagt
tacctggaggaggcagtgatgcacctggatcacagtgaccccatcactcgagaccacatg
ggctctgtcatgagccaggtgcggcagaagctcttccagttcctacaggcagagccccac
aacagcttgggcaaggctgcccgccgcctcatgataatgcttcagggcttggtcacaccc
agcatgacctaa

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