KEGG   Alligator mississippiensis (American alligator): 102569538
Entry
102569538         CDS       T03087                                 
Symbol
TSEN2
Name
(RefSeq) tRNA splicing endonuclease subunit 2
  KO
K15322  tRNA-splicing endonuclease subunit Sen2 [EC:4.6.1.16]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amj03016]
    102569538 (TSEN2)
Enzymes [BR:amj01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     102569538 (TSEN2)
Transfer RNA biogenesis [BR:amj03016]
 Eukaryotic type
  tRNA spricing factors
   tRNA splicing endonuclease complex
    102569538 (TSEN2)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N Dna2
Other DBs
NCBI-GeneID: 102569538
NCBI-ProteinID: XP_014453183
Position
Un
AA seq 465 aa
MAEAGFRAPRRKRRVYEPHRPPFPLPASRHFGPCRAEMLNNHVLVRSPEDMEQLYSQGYF
GKGILSRSRPEYSISDPLLVGKWRDAQINMPILTSKKYHCHVEWAKSLMQEQGLDDNLGK
ILENYIKPVPLPFMKEEGEADQCSKKMAPEIENKEDKVELSKDSSIINGDVVAPNVECHK
ESLDCRKPYLEGDLLHDPLAEYGSKELDTMDSTAMLIEHCQKHNYFTVYSGCKAEDNTEQ
QVSSKLASSTEYVQEYVLVQEEESSFCHDEAANEQSNSIKKEKLVCRRNPFRIFEYLQLS
LEEAFFLVYALGCLSIYYGEEPLTILELWKMFSDVQPSFRTTYMTYHYFRSKGWVPKVGL
KYGTDFLLYRKGPPFYHASYSVMAELVNDDFKGSLRRPFSWKSLSGLNRTTTNVSKELIL
CYLIRPSDMTEKEMSSPECMKRIKVQELIVNRWVSSRERNEQDEL
NT seq 1398 nt   +upstreamnt  +downstreamnt
atggccgaagcaggtttccgggccccgcggaggaagaggagagtgtacgagccgcaccgg
ccgccctttcccctgcctgcttcccggcacttcgggccctgccgggcggaaatgctgaac
aaccacgtgctggtccggagcccggaggacatggagcagctgtacagccagggctatttt
ggaaaaggtattctttcaagaagccgaccagaatacagtatttcagaccctttactggtt
ggtaagtggcgagatgcccagataaatatgcccattctaacatcaaaaaagtaccattgt
catgtagaatgggctaaaagccttatgcaagaacaaggacttgatgacaacttaggtaaa
attcttgaaaattacattaagccagttcccctgccttttatgaaagaggaaggagaggct
gaccaatgcagcaaaaaaatggctccagaaatagaaaataaagaagacaaagtggaactt
tcaaaagattcttccataattaatggagatgtggtagcaccaaatgttgaatgtcataag
gagagtctagactgcaggaaaccctatttggaaggggatctacttcacgatccattggct
gagtatggctctaaggaactggatacaatggattctacagccatgcttatagaacattgc
caaaaacacaattactttactgtatactctggttgcaaggcagaagacaacactgaacaa
caagtatcttccaagttggccagttctacagaatatgttcaagaatatgttctggtacaa
gaagaagaaagtagcttttgtcatgatgaagctgcaaatgagcaatcaaattccatcaaa
aaggaaaaattagtatgcagaagaaatccatttaggatttttgaatatttgcaacttagc
ctggaagaggctttttttttggtgtatgccctaggatgtttaagtatttattatggtgag
gagcctttaactatcttggaactatggaaaatgtttagtgatgtgcagcccagttttaga
acaacatacatgacctatcactactttcgcagtaagggatgggtccccaaagtaggactg
aagtatggaactgacttcttgctgtatcgaaaaggccctcccttttaccatgcaagttat
tctgtcatggctgaattagttaatgatgacttcaaagggtcactgcgcagaccatttagc
tggaagtctttgtctggcttgaatagaacaactaccaatgtgtctaaggagcttatatta
tgctatttgattagaccatctgatatgactgaaaaagaaatgtcatcaccagaatgtatg
aaaagaattaaagttcaggaattaattgtaaatcgctgggtctcttctcgagagcgcaat
gagcaagacgaactataa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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