KEGG   Alligator mississippiensis (American alligator): 102570082
Entry
102570082         CDS       T03087                                 
Name
(RefSeq) zinc finger protein RFP
  KO
K12009  tripartite motif-containing protein 27 [EC:2.3.2.27]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amj04121]
    102570082
Enzymes [BR:amj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102570082
Ubiquitin system [BR:amj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102570082
SSDB
Motif
Pfam: SPRY PRY zf-B_box zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-RING_6 zf-C3HC4_2 zf-C3HC4_3 zf-RING_2 zf-RING_5 U-box RbpA RDM Prok-RING_4 zf-RING_10
Other DBs
NCBI-GeneID: 102570082
NCBI-ProteinID: XP_019337958
Position
Un
AA seq 512 aa
MAAGDLAGSFQEEVTCSLCLDYFTDPVITDCGHNFCRTCISKCWGELEPNVCCPQCRETA
PQRNLRPNRQLGNMVELVKQLKLQAGREPEGQYVCERHQEALKLFCEENEAPICVICKES
REHQGHKVLPIEEAAKDYKEQIRSCLEHLREQREELQGLKCAWEKESERLLRQAELERQL
VVSECEGLRQLLGEHERFLLARLGELDAEIMRKREENAAYLCKETARLSSLIMELEGKCQ
QPVPELLQGVRSAYRFSWYNTSTDPTGTSYTGNNTALLVGEEVMPLHPGPKFPDLEKRIQ
NFPKEKKLQEAVMGFLKGLAAERGFRRARVHAVDVTLDPGTAYPELILSEDRKCVRHGDT
QQDLPNNPERFDTCPEVLGSEKFTGGRYYWEVEVGDKTCWALGVCRESVHRKGLVTLSPE
DGYWVMWLRDQKFKALTTPPTRLPMRLRPRKVGVFLDYEVGEVSFYNVTDGSHLFTFTET
FSGTLRPYFYTGLSAGGTNATPLILCPVPTKP
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggctgcaggagacctggcagggagctttcaggaggaggtgacttgctccctgtgtctg
gactattttacagatccagtgataactgactgtgggcacaacttctgccgcacctgcatc
agcaagtgctggggggagttggagccaaatgtctgctgcccccagtgcagggaaacggcc
ccacagagaaacctccggcccaacaggcagctgggcaatatggttgagctggtgaagcag
ctgaagctgcaggcagggagggagcccgaaggccagtatgtgtgtgagaggcaccaggag
gctctgaagctcttttgtgaggagaatgaagcccccatctgcgtgatctgcaaagagtcc
cgggaacaccaaggtcacaaggtgcttcccattgaggaggctgccaaggactacaaggaa
caaatccgtagctgcctggagcacctgagggagcagagagaggaactgcagggcctgaaa
tgtgcctgggagaaggagagtgaaagacttctgaggcaggcagagctggagaggcagctg
gtggtgtctgagtgtgaggggctgcgccagctcctgggtgaacatgagcgcttcctgctg
gcccgcctgggagaactggatgcagagataatgaggaagagggaggaaaatgctgcctac
ctgtgcaaggagactgctcgcctcagctccctaatcatggagctagaggggaagtgtcag
cagccagtgcctgagctcctgcagggtgtccgaagcgcatatagattctcttggtacaat
accagtacagatcccactggtacaagctatacagggaacaacactgctttgctagtgggt
gaggaggtgatgcctctgcatccaggccccaagttccctgacctggagaagagaatccag
aatttccccaaggagaaaaagcttcaggaagctgtgatgggatttctgaaggggctggct
gcagagagaggattcagaagagcccgagtacatgcagtggatgtgactctggacccaggc
acagcttatcctgaactcatactgtctgaggatcggaaatgtgtgagacacggagacaca
caacaggacctacccaacaaccctgaaagatttgatacttgcccagaagtcctgggctct
gagaagttcacaggcgggaggtactactgggaggtggaggtgggagacaagacatgctgg
gctctgggtgtgtgcagggagtctgtgcacaggaaagggctggtcacactgtcacctgag
gatgggtactgggtcatgtggctgcgagatcagaaattcaaagccctcaccaccccccca
actcgcctccccatgcgcctgcggcccagaaaggtgggtgttttcttagactatgaggtg
ggtgaagtctcattttacaatgtgactgatgggtcccacctcttcactttcactgaaacc
ttctctgggaccctgcgcccatatttttatactggtctcagtgctgggggcaccaatgca
actcccctgatcctgtgcccagtcccaaccaagccctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (16)   
   Pfam (16)   
All databases (27)   

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