KEGG   Alligator mississippiensis (American alligator): 102570644
Entry
102570644         CDS       T03087                                 
Symbol
DDX20
Name
(RefSeq) DEAD-box helicase 20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:3.6.4.13]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amj03041]
    102570644 (DDX20)
Enzymes [BR:amj01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     102570644 (DDX20)
Spliceosome [BR:amj03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    102570644 (DDX20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19 SiaC AAA AAA_22 CMS1
Other DBs
NCBI-GeneID: 102570644
NCBI-ProteinID: XP_014456620
Position
Un
AA seq 778 aa
MAAPAVAVSRFRTRDVLVPGGPADFGSLLLSAPVLAGLEAAGFRRPSPVQLKAIPLGRCG
LDLIVQAKSGTGKTCVFSTVALDSLVLENPATQILILAPTREIAVQIHAVISTIGIKMEG
LECHVFIGGTPLNQDKIRLKKCHIAVGSPGRIKQLIELDYLNTASIRLFILDEADKLLEE
GSFQEQVNWIYSSLPANKQMLAVSATYPDSLANALTRYMREPTFVRLNPTDPSLIGLKQY
YKVVNFHSLPHKTFEEKAQHLQELFSKVPFNQALVFSNLHSRAQHLAEVLTSKGFPAECI
SGSMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVINLDVPLDWETYMHRIGR
AGRFGTLGLSVTYCCRGEEENLMMKIAQKCNLQLHPLPEPIPPGLMDQFADWDVEVTAVA
HIEALNAGTLPCERPEEAMQLPPTGSCVETPPHPPAVSSESSSMAKPKKAPKQKLPKGCS
GGANSEKSSKSPKALKCSVEQSGQKKTAPKMTRQNTDQPVDRETLQNMLPKIPCLSSFKR
QQPGSPWSFAEFLEDYEYFIKEGLEKEVEIVTTYTGPGEPYQHPENGALEFREMKETTHV
VVDSARFEESDSDSSSYTSRASSCMENKSCFEASSDAQEKENVVASDQVLLSTSLHLAQP
SRPEELKPIPQAPKQNPARRKVKKQQPKKKSPHNQVPNPSQGAVYADCSDGPWDGRMPGS
RYEPQSYEDYWKSYYQAWQSYYAAAPHSYYRKCYRHFTWMSAYHANSVYLQELLKNDG
NT seq 2337 nt   +upstreamnt  +downstreamnt
atggcggcgcccgctgtggcggtctctcgttttcgcacccgcgatgtgctggtgcccggc
ggcccggccgacttcggctccctgctgctgtcggccccggtgctggcggggctggaggcc
gccggcttccgcaggccgtcgccggtgcagctcaaggccatcccgctgggccgctgcggc
ctggatctcattgtccaggcaaaatctggcaccggcaaaacctgcgtgttctcgacagtg
gcccttgactccctcgtgctggagaacccagccacccagatactcatcttagcacccacg
agagagattgctgtgcagattcatgctgttatttcaactattggaataaaaatggagggc
ctggaatgtcacgtcttcattggaggcacccctttaaaccaagataaaatcagactaaaa
aagtgccacatagctgttgggtccccaggtcgaataaagcaacttatagagctggactat
ctgaacactgctagcatccgcctttttatccttgacgaagcagacaagcttttggaagaa
ggcagcttccaggagcaagtcaactggatttattcttctttgccagccaacaaacagatg
ctcgctgtttcagctacctacccagattcgctggcaaatgctttgaccagatacatgaga
gagcctacctttgtgaggctgaaccccactgatccaagtctcattgggctgaagcagtat
tacaaagttgtgaattttcattcacttcctcacaagacttttgaagagaaggctcagcat
ctacaggagctcttcagcaaggttccatttaatcaggctttggtcttctcaaacttgcat
agtagggctcaacacctggctgaagtactgacatccaaagggtttcctgctgagtgcatt
tcaggcagtatgaaccagaaccagcgactcgatgccatggctaaactgaagcagttccat
tgcagagtcctgatttccacagatttaacctctcgtggaattgatgctgagaaggtgaat
ctggtcattaacctggatgtacctttggactgggagacgtacatgcatcggatcggcaga
gctgggcgctttggcaccttaggcttatctgtgacgtactgttgccgtggggaggaagag
aatttgatgatgaagattgcacagaagtgtaatctgcagctccatcctttgccagaacct
atccctcctggattgatggaccagtttgcagattgggatgtagaagtcacagctgtggct
catatagaggctttgaatgctgggaccttgccctgtgaaaggccagaggaagcaatgcaa
ctgccacccacaggtagttgtgtagagacacctccacatcctcctgctgtttcaagtgaa
agttcttccatggcgaagccaaaaaaggctcctaaacagaagctaccaaaaggctgctca
ggtggtgccaactcggaaaaaagtagtaagagtccaaaggctttgaaatgcagtgtagag
cagagcggtcaaaagaaaactgcccccaaaatgacgagacaaaataccgatcagcccgtg
gacagagaaaccttacaaaacatgctgcctaagattccttgtctgtcctcttttaagcgc
cagcagcctggcagtccctggagctttgctgagtttcttgaggactatgaatacttcatt
aaggagggactggagaaggaggttgaaattgtaacaacctacactggcccaggagagcct
taccagcaccctgaaaatggggccttagaattcagggagatgaaagaaacgacccatgta
gtagtagacagcgcccggtttgaggagtcggacagtgacagcagctcctacacttccagg
gcttcctcctgtatggaaaacaagtcctgtttcgaagcttcctcagatgcgcaggagaaa
gaaaacgtcgttgccagtgaccaggttcttctgagcacttctctacacctcgcccagcca
tcgagaccagaagagctcaaaccaataccacaagccccaaagcaaaatccagcgagaagg
aaagtgaagaaacaacaacccaaaaagaaaagccctcataatcaagtccctaatccttca
cagggggcagtttatgctgactgttcagatggcccttgggatgggagaatgcctggctct
cgatacgagcctcagagttatgaggattactggaagtcttattaccaagcatggcagagc
tattatgctgcagctccacattcatactataggaaatgttacagacacttcacctggatg
agtgcttatcacgctaactcagtctatctccaagaactgctgaagaatgatgggtga

DBGET integrated database retrieval system