KEGG   Alligator mississippiensis (American alligator): 102571239
Entry
102571239         CDS       T03087                                 
Symbol
CALR
Name
(RefSeq) calreticulin
  KO
K08057  calreticulin
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04141  Protein processing in endoplasmic reticulum
amj04145  Phagosome
amj04148  Efferocytosis
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    102571239 (CALR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102571239 (CALR)
   04148 Efferocytosis
    102571239 (CALR)
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102571239 (CALR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:amj03110]
    102571239 (CALR)
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:amj04091]
    102571239 (CALR)
Chaperones and folding catalysts [BR:amj03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   102571239 (CALR)
Lectins [BR:amj04091]
 Calnexin / calreticulin
  102571239 (CALR)
SSDB
Motif
Pfam: Calreticulin DDHD
Other DBs
NCBI-GeneID: 102571239
NCBI-ProteinID: XP_006262375
Position
Un
AA seq 414 aa
MSPFLVLCGLLGLAAAGPAEFFREEFADGDTWTSRWVESKHKSDYGKFKLTAGKFYGDSE
KDKGIQTSQDARFYAISSRFEPFSNRGKTVVVQFTVKHEQNIDCGGGYVKLFPASLSQED
MHGDSEYNIMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNT
YEVKIDNGKVESGNLEDDWDFLPPKKIKDPEAKKPEDWDERAKIDDPTDTKPEDWDKPEH
IPDPDAKKPEDWDEEMDGEWEPPVIQNPEYKGEWKPRQIDNPDYKGKWVHPEIDNPEYTP
DPSLYAYDSFGVIGLDLWQVKSGTIFDNFLITDDEKFAEEFGSETWGATKDAEKKMKEQQ
DEEQRKKQEEEDKKRKEEEGEAEGDEDEDEDDDDEDEPEKEDEEETEGPGKDEL
NT seq 1245 nt   +upstreamnt  +downstreamnt
atgagcccgttcttggtgctgtgcggcctcttgggcttggcggcggcggggcctgcggag
ttcttccgggaggagttcgccgacggagatacctggacgagccgctgggtggagtcaaag
cacaaatctgactatgggaagttcaagctgacggctggcaagttctatggggacagcgag
aaagacaaaggaatccagacaagccaggacgcccgcttctatgccatctcatcccgcttt
gagcctttcagcaaccggggcaagacggtggtggtgcagttcacagtgaagcacgagcag
aacattgactgtggtgggggttatgtcaaactcttcccggccagcctgagtcaggaggac
atgcatggagactctgagtacaacatcatgtttggtcctgacatttgtgggcctgggacc
aagaaagtccatgtgatcttcaactacaagggcaagaatgtgctcatcaacaaggacata
cgctgcaaggatgacgagtttacccacctgtacaccctcattgtccggcccgacaatacc
tatgaagtgaaaatagacaatggcaaggtggaatcgggcaacctggaggacgactgggac
ttcctgccacccaagaagatcaaggaccctgaggccaagaagcctgaggactgggatgaa
cgggccaagattgatgaccccacagacaccaagcctgaggattgggacaagcctgagcac
atccctgaccctgatgctaagaaacctgaggactgggatgaggagatggatggcgagtgg
gagcctccggttatccagaaccccgagtacaagggggagtggaagccgcgccagattgac
aaccctgactacaagggcaagtgggtacaccctgagatcgacaaccctgagtacacgcct
gatcccagtctatatgcctatgacagctttggagttattggccttgacctgtggcaggtg
aagtctggcaccatttttgataacttcctgatcacagatgatgagaagttcgcagaggag
tttggcagtgagacgtggggggccaccaaggatgcagagaagaagatgaaggagcagcag
gatgaagaacagcgcaagaaacaggaggaggaggacaagaagcggaaggaggaggagggc
gaggccgagggggacgaggatgaggatgaggatgatgatgacgaggatgagcctgaaaag
gaggatgaagaggagacagaggggcctgggaaggatgagctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

Download RDF
DBGET integrated database retrieval system