KEGG   Alligator mississippiensis (American alligator): 102573126
Entry
102573126         CDS       T03087                                 
Symbol
TRIM71
Name
(RefSeq) tripartite motif containing 71
  KO
K12035  tripartite motif-containing protein 71 [EC:2.3.2.27]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amj03019]
    102573126 (TRIM71)
   04121 Ubiquitin system [BR:amj04121]
    102573126 (TRIM71)
Enzymes [BR:amj01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     102573126 (TRIM71)
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     102573126 (TRIM71)
Ubiquitin system [BR:amj04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    102573126 (TRIM71)
SSDB
Motif
Pfam: NHL Filamin DUF5128 zf-B_box SGL zf-RING_5 zf-C3HC4 zf-RING_UBOX DUF4094 COG5_N
Other DBs
NCBI-GeneID: 102573126
NCBI-ProteinID: XP_019353654
Position
Un
AA seq 855 aa
MASFGEADFPVCPLCKEACGSASSSSSSSSSSSHGGGGGGSSSSSSSSGGGGGAPSRRLH
VLPCLHAFCRQCLEAQRGAGGGEALKLRCPVCDQKVVISEPSGMDALPSSNFLLSNLLDV
VVVAAAAEEHKNGRAGAVGPXAXXXPSSSSSSSSSSSAGGGGGGAPSGPLLLRRPHSRQG
EPRCSSCDEGNAASARCLDCQEHLCDNCVRAHQRVRLTKDHFIERFAAPAPGPGPAGAAQ
LGLSPPYPAAPYSILSVFPERASYCQHHDDEVLHFYCDTCSVPICRECTMGRHVGHSFIY
LQDALQDSRTLTIQLLADAQQGRQAIQLSIEQAQAVAEQVEMKAKMVQSEVKAVTTRHKK
ALEERECELLWKVEKIRQVKAKSLYLQVEKLRQNLNKLDNTISAVQQVLEEGRTIDILLA
RDRMLAQVQELKNVRGLLQPQEDDRIMFTPPDQALYMAIKSMGFVSSGAFAPLTKATGEG
LKRALQGKVASFTVMGYDHDGEPRLSGGDMISSVVMGPDGNLFGADVSDQQNGTYVVSYR
PQLEGEHLVSVMMCNQHIENSPFKVMVKSGRSYIGIGLPGLSFGSEGDSDGKLCRPWGVS
IDKEGYIVVADRSNNRIQVFKPCGTFHHKFGTLGSRPGQFDRPAGVACDISRRIVVADKD
NHRIQIFTFDGQFILKFGEKGTKNGQFNYPWDVAVNSEGKILVSDTRNHRVQLFGPDGVF
LNKYGFEGALWKHFDSPRGVTFNHEGHLVVTDFNNHRLLVIHPDCQSARFLGSEGTGNGQ
FLRPQGVAVDQEGRIIVADSRNHRVQIFESNGSFLCKFGTQGSGFGQMDRPSGIAVTPDG
MIVVVDFGNNRILVF
NT seq 2568 nt   +upstreamnt  +downstreamnt
atggcttccttcggcgaggcggacttcccggtgtgcccgctgtgcaaggaggcgtgcggc
tcggcctcgtccagctcctcctcctcctcctcctcttcccacggcggcggcggcggcggc
tcctcctcctcctcctcctcgtcgggcgggggcgggggcgccccgtcgcggcggctgcac
gtgctgccctgcctgcacgccttctgccgccagtgcctggaggcgcagcggggcgcgggc
ggcggggaggcgctgaagctacgctgccccgtctgcgaccagaaggtggtgatctcggag
ccgtcgggcatggacgcgctgccctcctccaacttcctcctcagcaacctgctggacgtg
gtggtggtggcggcggccgccgaggagcacaagaacgggcgggccggcgccgtggggccg
ngggcnnnnnnnnnnccctcgtcctcgtcttcctcgtcctcgtcgtccagcgcgggcggc
ggcggggggggcgcgccgtcggggccgctgctgctgcgccggccgcacagccgccagggg
gagccgcgctgcagctcgtgcgacgagggtaacgcggccagcgcccgctgcctggactgc
caggagcacctgtgcgacaactgcgtgcgcgcccaccagcgcgtccgcctcaccaaggac
cacttcatcgagcgcttcgcggcccccgcgcctgggcctgggcccgccggcgccgcccag
ctcggcctcagcccgccctaccccgccgcgccctacagcatcctctccgtcttccccgag
cgcgccagctactgccagcaccacgacgacgaggtgctgcatttctactgtgacacttgt
tctgtcccaatctgccgggaatgtaccatgggacgacatgtaggtcatagttttatctac
ctccaagatgcccttcaagattcaagaaccctcaccatccagctgctagcagatgctcag
caaggacgccaggctattcagctgagtattgaacaggcccaagcagtggcagagcaagtt
gaaatgaaagctaaaatggtgcagtctgaagtcaaagctgtgacaactagacataagaag
gccctggaagaaagagagtgtgaactgctatggaaggtggaaaagattcgtcaagtcaaa
gccaagtcgctctacttgcaagttgaaaagttgcgtcagaacctgaataaactggacaac
acaattagtgctgttcagcaggtcctagaggaggggcgcaccatagatattcttctggcc
cgggaccgcatgctggctcaggtgcaggagttgaagaatgtgagaggccttctgcagccc
caggaggatgacagaatcatgttcacaccacctgaccaggctttgtacatggccataaaa
tcaatggggtttgttagcagtggggcttttgctcctctgaccaaagccactggggaaggt
ctcaaacgtgcactacagggcaaagtggcctccttcacagtgatgggatacgaccatgat
ggtgagccacgcctttcaggaggcgatatgatctcttcagtggtgatgggccctgatgga
aacctgtttggagccgatgttagcgatcagcaaaatgggacctacgtggtcagttacagg
ccacagctggagggagagcatcttgtttcagtcatgatgtgcaaccagcacattgagaac
agtccattcaaggtcatggtgaaatctgggcgcagttacattggcattgggctaccaggg
ctttcgtttggcagtgagggagatagtgacggcaagctgtgtcgtccctggggagtcagc
atagacaaagagggctacatcgttgttgctgatcgcagcaataaccgcattcaggtgttt
aagccttgtggcacctttcaccacaaatttggcacgttaggctctcggcctggccagttt
gatcgacctgcgggtgttgcctgtgacatctcacgtaggattgttgtggctgacaaggac
aatcatcgcatccagatcttcacatttgacgggcagttcattctgaaatttggggagaaa
ggaaccaagaatgggcaattcaattacccatgggatgtggcagtcaactctgaaggcaaa
atcctggtctctgatacaaggaaccaccgagttcaactcttcgggcctgatggcgtgttt
ctgaataagtatggctttgaaggggcactctggaagcactttgattccccaaggggtgtg
actttcaatcatgagggccacttagtagtcacagatttcaacaaccatcgccttttggtc
atccatccagattgccagtcagcacgcttcctcgggtcagaaggcactggtaatggccag
ttcctgcgcccacagggtgtggcagtggatcaagaggggcgcatcattgtggctgattct
aggaaccaccgagtgcagatatttgagtccaatggtagctttttatgcaaatttggcact
cagggaagtggctttggtcagatggaccgtccttcgggtatagcagtcacccctgatggc
atgattgttgtggtcgactttggaaacaatcggattctcgtcttctaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (10)   
   Pfam (10)   
All databases (22)   

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