KEGG   Alligator mississippiensis (American alligator): 102575288
Entry
102575288         CDS       T03087                                 
Symbol
PRF1
Name
(RefSeq) perforin-1
  KO
K07818  perforin 1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    102575288 (PRF1)
SSDB
Motif
Pfam: MACPF C2
Other DBs
NCBI-GeneID: 102575288
NCBI-ProteinID: XP_006262884
Position
Un
AA seq 632 aa
MQYMHLLLPQSGWGVGRWENTIPKSLNGHHWEFLSRSRPARSEPRTKDCTVPTMPCPRPF
ILLLLLVPMTAPHCHQATEEECEEHTAFVPGHGLVGEGFDITTLARKGAYVVDVGRWERP
DGTCTLCSNTLQDRDLQRLPLAMADWRIQVSCKSMVASSLRRSAVEVANEASTAVENDWR
VGLEVDVPSKGSAQVAVAGSHSKMAEFSAAKAQEDKYSFATHEVSCQYYRFRIAHQPPLS
PHFTRAVRDLPRDYTPASHFEYHNFIATYGTHYLTSVHVGGRIRDITAIRTCQTALDGLT
ADEVKDCLEVEAAVSTGTGTAKVEAASKMCEEQRQKENLKTSFHEAYKERHTEIIGGHDH
IDLLFSNGQDASAYTSWLEGVKANPGLLSYTLAPLHVLVKKKDPRRKALQRAVSKYIHGR
ALWRNCTQPCPPGTQRSVRDPCSCVCPGDDVANTMCCSKKRGLGKLEVTIKRGQGLWGDH
FSRTDAYVKVFYLEKLLQTSTVNNNDNPTWNIRLDFGAVTVTAASKLRVQVWDEDNGWDD
DLLGTCDELVVAGASRQKTCYLKHGKLEYQYQLQCGPSLGGDKCQDYVPQPPDVAVNWTG
IGQTLGGKHGDESKRGGAGRDLQGPRLVQPLV
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgcagtacatgcatctcttgttgccccaaagtggttggggggttggtagatgggaaaat
accatacccaagtctctcaatggccaccactgggagttcctctctcgttctaggccagcc
aggagtgaacccaggacaaaggactgcactgttcccaccatgccctgtcctagacccttc
atcctcctcctcctcctggtgcccatgacagcccctcactgccaccaggccacagaagag
gagtgtgaggagcacacggccttcgtgcccggccacggcctggtgggagaaggcttcgac
atcaccacgttggcccggaagggtgcttacgtggtggacgttgggcggtgggagaggccg
gatgggacctgcaccctgtgctctaacacacttcaagacagggatctccagcgcctcccc
ctggccatggccgactggcggatccaggtctcgtgcaagagtatggtggccagctccctg
cgccggtcggctgtggaggtggccaacgaagccagcacagctgtggagaatgactggagg
gtggggctcgaggtggacgtcccttccaagggcagtgcacaggtggcagtggctgggtcc
cactccaagatggccgaattcagcgcagccaaggcccaggaggacaagtactccttcgcc
acccatgaggtctcctgtcagtactaccggttccgcatcgcccaccagcctccgctctcc
cctcacttcacccgggccgtaagggacctgcccagggactacaccccggcctctcacttt
gagtaccacaatttcattgccacctacggcacccactatctcaccagtgtgcatgtgggg
ggccgaatccgggacatcacagccatccggacctgccagacagcgctggatgggctgaca
gctgacgaagtcaaggactgcttggaggtagaagcggctgtgagcactgggactgggact
gccaaggttgaggcagcctccaagatgtgcgaggagcagcgccagaaggagaacctcaag
acgagcttccacgaggcctacaaggagcgccacacggagatcatcggaggccacgaccac
atagacttgctcttctccaatgggcaggacgccagtgcctacaccagctggttggaaggt
gtcaaagccaaccctggcctgctctcctacaccctggcacccctccacgtcttggtcaag
aagaaggacccaaggaggaaggctctccagcgagcagtgagcaagtacatccatggccgg
gccttgtggaggaactgcacccagccgtgcccgccgggcacccaacgtagtgtccgggac
ccctgctcctgcgtctgccccggggatgatgtggccaacaccatgtgttgctccaagaag
cggggtctgggcaagctggaggtcaccatcaaacgtggccaaggcctgtggggcgaccac
ttcagtcggacggacgcctatgtcaaggtcttctacctggagaagttgctccaaaccagc
actgtgaacaacaatgacaatcccacctggaacatccgtctggatttcggggctgtgacg
gtcaccgcggcctccaagctgcgggtgcaggtgtgggatgaagacaatgggtgggacgat
gacctcctggggacctgtgatgaactcgtagtagctggtgcctcccggcaaaagacctgc
tacctgaagcacggcaagctggagtaccagtaccagcttcaatgtgggcccagtctgggg
ggggacaagtgccaggactatgtcccacagcctcctgatgttgcagtcaactggaccggg
attgggcaaaccctgggagggaagcatggagatgaatcaaagagaggtggagctgggagg
gacctccagggcccacgtctagtccaaccgctggtctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

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