KEGG   Alligator mississippiensis (American alligator): 102575480
Entry
102575480         CDS       T03087                                 
Name
(RefSeq) zinc finger protein 883-like
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102575480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amj03000]
    102575480
Transcription factors [BR:amj03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    102575480
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 zf-C2H2_6 zf_UBZ XPA_N zf-C2H2_11 Zn-ribbon_8 C1_1 zf_C2H2_ZHX zf-trcl FYVE Zn_Tnp_IS1595 LIM
Other DBs
NCBI-GeneID: 102575480
NCBI-ProteinID: XP_019344449
Position
Un
AA seq 516 aa
MHTREKPHQCSECGKTFAHSSRLAQHQRIHTGDKPDQCSDSGKSFNHFFTLARHQRIHTG
EKPHKCSECGKSFSYSSYLAEHQRIHTGEKPYQCSECGKSFPRSYNLAQHQRIHTGEKPH
QCSECGKSFTHSSTLAQHKHIHQRMHRGEKPHQCSECGKSFPRSYSLAQHQRIHTGEKPH
QCSECGKSFNRSSHLARHQRIHTGEKTYQCSQCGKRFTQSSYLAQHQRIHTGEKTYQCSE
CGKSFTFSFRLAQHQRIHTGIKPHQCSECGKSFTQSFSLAQHQRIHTGEKPHQCSECGKS
FTQSSTLARHQRIHTGEKPHQCSECGKSFSRFSHLAVHQRIHTGEKTHQCSECRKSFSRS
SHLALHQRIHTGEKPHQCSECGKRFTFSFHLALHQRIHTGEKPHQCSECGKSFTFSFHLA
QHQSIHTGEKPHQCSECGKRFTRSTLGFLSQAALSLGLTAVPRPSPGLTAVPRPSSGAHH
TRTWASQLPLSGAGVYASRTLRPYWRWDSHGTVGAI
NT seq 1551 nt   +upstreamnt  +downstreamnt
atgcacacaagagagaagccacatcagtgttcagagtgcggtaagaccttcgctcactcc
tccagactggctcagcaccagcgtatccacacaggggacaagccagatcagtgctcggac
tctgggaagagcttcaatcacttcttcaccctggctaggcaccagcgtatccacacaggg
gagaagccacataagtgttcagagtgtgggaagagtttcagttactcctcctacttggct
gaacaccagcgtatccacacaggggagaagccctatcagtgctcagagtgtgggaagagt
ttccctcgctcctacaacctggcccagcaccagcgtatccacacaggggagaagccccat
cagtgctcagagtgtgggaagagcttcactcactcctccaccctggctcagcacaagcat
atccaccagcgtatgcacaggggggagaagccccatcagtgctcagagtgtgggaagagt
ttccctcgctcctacagcctggctcagcaccagcgtatccacacaggagagaagccccat
cagtgctcagagtgtgggaagagcttcaatcgctcctcccacctggctcggcaccagcgt
atccacacaggggagaagacatatcagtgctcgcagtgtgggaagagattcactcagtcc
tcctacctggctcaacaccagcgtatccacacaggggagaagacatatcagtgctcagag
tgtgggaagagcttcactttctccttccgcctggctcaacaccagcgtatccacacaggg
attaagccccatcagtgctcagagtgtgggaagagcttcactcagtccttcagcctggct
caacaccagcgtatccacacaggggagaagcctcatcagtgctcagagtgtgggaagagt
ttcactcagtcctccaccctggctcggcaccagcgtatccacacaggagagaagccccat
cagtgctcagagtgtgggaagagcttcagtcgcttctcccacctggctgtgcaccagcgt
atccacacaggggagaagacacatcagtgctcagaatgtcggaagagtttctctcgctcc
tcccacctggctctgcaccagcgtatccacacaggggagaagccacatcagtgctcagag
tgtgggaagagattcactttctccttccacctggctcttcaccagcgtatccacacaggg
gagaagccccatcagtgctcagagtgtgggaagagcttcactttctccttccacctggct
cagcaccagagtatccacacgggggagaagccacatcaatgctcagagtgtgggaagaga
ttcactcggtccactctgggcttcctcagtcaagccgccctgtctctcgggctcaccgca
gtgccacgcccttctccggggctcaccgcagtgccacgcccttcctcaggggctcaccac
acccgcacttgggcttctcaactgcccctctctggggctggggtctatgcatcccgcacg
cttcgcccttactggcgctgggattcccacggtactgtgggtgccatatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein domain (14)   
   Pfam (14)   
All databases (22)   

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