KEGG   Alligator mississippiensis (American alligator): 102576988
Entry
102576988         CDS       T03087                                 
Name
(RefSeq) uncharacterized LOC102576988
  KO
K06560  mannose receptor, C type
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04145  Phagosome
Brite
KEGG Orthology (KO) [BR:amj00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102576988
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amj04131]
    102576988
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:amj04054]
    102576988
   04090 CD molecules [BR:amj04090]
    102576988
   04091 Lectins [BR:amj04091]
    102576988
Membrane trafficking [BR:amj04131]
 Endocytosis
  Phagocytosis
   C-lectin receptors
    102576988
Pattern recognition receptors [BR:amj04054]
 Membrane-bound pattern recognition receptors
  C-type lectin receptors
   102576988
CD molecules [BR:amj04090]
 Proteins
  102576988
Lectins [BR:amj04091]
 C-Type lectins
  Group 6: Mannose receptor family
   102576988
SSDB
Motif
Pfam: Lectin_C
Other DBs
NCBI-GeneID: 102576988
NCBI-ProteinID: XP_019333900
Position
Un
AA seq 2162 aa
MANIMVTLITSEKVLPTKFTLNCPQAPCWHYWQGHCYCVERSRTGTWIEALRYCKRYRDT
ELLTITNPSEKMWILQLPLDNFWIGLNNLEDMTNFRWSEGSPADLTAPWSWITHPVQPNT
TYCVKISNGNLIPLDCNAKAHWICKRSADVERYQEHKAKVLLSSTRDPLEVHADLHFAKE
ACLELREKCTGISTWQNAYVLARGTELMKSEESNSYAYVKSDCAMGYFGKDCSSVCSLCY
NNGLCNPYTGTCNDFHFCSAQSAPTACQREMKSVWCPRFPGWSYWEGNCYFVSTEASVSW
VKARQMCRRFRSADLLWIGSQKELAWLLSLITSETFWIGLNSRQQESIWIWSNGNSAAKE
LHWLPMSGESAGRCAGMKSTSSSILKLNCENEHRWLCKKTESPNIFDAFLEQYLSGPLSS
KKIYDSLHDAKIDCLYDNNCTGVVKVSNYFRRVAGIDEIHFSELAADSDVVTYVKQECSF
GYYGENCMQLCPSCRGKFRCNSVMGRCPEKLICMDQFKGEICESGLTSLKCPQDPIWWYW
NGNCYYIERKEMMPWEQGLAQCTFYNNASLAKLDNEEEKMWVASMLEGDAWIGLSRQQDA
WNWISEHGAELNSSWLSDIQMDQHGCAQIKKGGILMATNCSTHLYWVCKKPADVDIFLEY
PGHLLLSLAEMAQYKTLMEAKFYCAMKETCTGINSWPSRFSLVSGTEMVTATIRNAVYLK
TSCVSGRYGYGCKEACPDCRNNLPCNSLTGICDENTRCLAPFSTRSCVISTVSLKCPELG
WQYWNRYCYFILPANWKPWKDANTTCSRYRGAELLWFESVEELTWITEVVFGETWTGLQD
INQDGIWAWAHEDSASSVLPWLVLKKKKRQRRCVELTADKYVSVADCNKAKGWVCKKAAE
PDLDVFMGFWDTVTVFPTLTISNNYTNHTLAREQCVKQKRGCLGYMLWRDAYLLIPNSEL
VIGGFAPSVTYLKSACNVGYYGVSCEQECSRCYWDRPCNSISGECVDSVVCAAPEDVGAC
DLGKYSLKCPLGFGWWYRNGWCYLIEGNRNLSWMEARLFCSHFKGTSLLKLESSAEKDWL
QKMIKWPVWIGMNRATSDSAWQWIDGATADTWIKVQGNATANCVAVWYNETTLRGVDCLS
KHNFVCKRRESENMFQFYAGHIIMHSQNAIPKVHSSLKSAENACLYERTHCTGIVYSKKQ
YHLVGGTEIFRSSYKADSLYLKTGCHPGYYGSDCQSTCRPCDRGLPCNGVTGHCVGTSSV
TCSLQSQDPQCSPGEVSRQLCPQGPEWHYFLKTCYYIEDTKTKTWSEARRACQGFKDTDL
AIITDNVEKTWIQFKGENSWIGMTYKKEDSLYMWVDGKPAHAESAWVIRTNRRHMLVKED
CVVAFKHYFSPAHCFSLRKWICKRKEVLNYFTVHEGRVLYSPYVPASNIYNNVTAAKDAC
SHLQNCTGVVVVGEHNIVQSGTELYNSRNRTVKTLIKSDCVSGRFGPLCEHECPPCQQGV
SCNPHTGKCGDTVFCTTESSSIPCEKGSLFGGSCPVEDEWQYWQGSCYYIPRAKRQSWQH
ARDLCRRYRDTDLLWLARPEEKEWLFSKVPKASFWTGLYGVRWCSVLKWSNSQIPFARSA
WLSLHKWTVTAKCCVQLNALKGHLAAVYCFQKAPGICKRKEEGMIDFQEFQGYYVVGTYT
SNSSYQSSLEAVQLCRFQRSTCNAVGTIKGEYRTMFATRLLLISGALGDESAAYIKSACA
SGYYGPECQGSCTCNKIENCNPFTGECAEYLQCSEKYVAQQCQRGVVSLKCPENPGWWYW
NGRCYYIEETNSSTWLEAKNFCTAYNGTDLLVLDSAEEEAWITSVLNKPAWIASVVSLQR
DKENTGRKNQHILVSHTKNTTLTACDQLTANGSLNQINCSSSASWVCKRNEGNGIFWKYP
RMLLLQPLGGLTYTFLEVAMSACIIAADCSGVTYWGQSYIPVSGKELIFNRKRNVAVYLK
SACSEGRYGMYCQQKCPRCLSHTTCNRITGLCDGAVTCHEIKKLELCEYDLTSKMCFPFW
KYWNGNCYYIPPFGALNKSGAEFMCGQYEGSQLLKLQDAEEQRWIAKVISKKSWLLKLSH
NLQSKTWIMPGRDTEVPHWGFQEAQDLCIQIEPVNGTLISSPCSELASWICKVTPEGVCL
RL
NT seq 6489 nt   +upstreamnt  +downstreamnt
atggcgaacattatggtgactctcataaccagtgagaaggtactccccaccaagttcaca
ttgaattgtcctcaagccccttgttggcactactggcaaggacattgctattgcgttgaa
aggagtcgtactggaacttggattgaagcattgcgatactgcaaacgatatcgagacaca
gaactattaacaatcacgaatccttcagaaaaaatgtggattttacagttgcctctggac
aatttttggattggattgaataatttggaagatatgactaattttagatggtccgaagga
tcaccagcagatctgacagcaccctggtcttggatcacacacccagttcagccaaacact
acgtactgtgtgaaaatttctaacggcaacttgattcctttggactgtaatgccaaggcc
cattggatatgcaagagaagtgcagatgttgagcgatatcaagaacataaagccaaagtc
cttctctcatcaacacgtgatccattagaagtacatgcagatttgcactttgctaaagaa
gcctgcctggaacttagggagaagtgcacaggaatttctacctggcagaatgcttatgtc
cttgctagaggaacagaattgatgaaaagtgaagagagcaattcctacgcctacgtaaaa
tcagattgtgctatgggttacttcggaaaggattgttcgtctgtgtgcagtttatgttac
aataatggcctctgcaatccatacacaggcacttgcaatgatttccacttttgcagtgcc
cagagtgcaccaacagcctgtcaaagagaaatgaaaagtgtatggtgcccacgttttcct
ggttggtcgtattgggaaggcaactgttactttgtgagcacagaagcctctgtcagttgg
gtaaaagcaaggcagatgtgtagaagattcagaagtgcagatctgctgtggattgggagt
caaaaagaactggcttggctgttgtctctaattacatctgaaactttttggattggactg
aatagcaggcagcaagagtctatatggatttggtcaaatgggaactcagcagccaaagaa
cttcactggttaccgatgtctggagagtcagctggaagatgtgccggtatgaaatcaaca
tcctcaagtattttgaagttaaactgtgagaatgagcacaggtggctctgtaagaaaact
gaatcaccaaacatttttgatgcgtttcttgagcaatacctatcagggccgctttcatca
aagaaaatatatgactcccttcatgatgccaagatagactgtttatacgacaacaactgc
acaggagtagttaaagtctctaattacttcagaagagtggcaggaattgatgagatccat
ttttctgaattggctgctgactcagatgtcgttacatatgtgaaacaggaatgttctttt
ggatactatggagaaaactgtatgcagctgtgtccctcatgccgtggaaagtttaggtgc
aactcagtaatgggcagatgcccagaaaagttaatttgcatggaccaatttaaaggtgaa
atttgtgaatcaggcctcaccagtttaaaatgccctcaagatcctatctggtggtattgg
aatggcaattgttactacatagaaaggaaagagatgatgccatgggagcagggcttagct
cagtgtacattttataacaatgctagtcttgctaagctagataatgaagaagaaaagatg
tgggtagcttccatgttggaaggtgacgcctggattggtttgtcaaggcagcaggatgcc
tggaattggattagtgaacatggggctgaacttaactccagctggctttcagatattcaa
atggatcaacatggatgtgctcagatcaagaaaggaggcatacttatggcaactaattgt
tccacacacctctactgggtctgtaaaaaaccagcagatgttgatattttcttggagtat
cctgggcatcttttgctttctcttgctgagatggctcagtacaagaccctaatggaagcc
aagttctactgtgcaatgaaagagacgtgtactggaataaatagttggccatccaggttt
tcccttgtctcaggaactgaaatggtgactgcaaccattagaaatgcagtttacttgaaa
acaagctgtgtttctgggcgatatggatatggatgtaaggaagcctgccctgactgccgt
aataacctaccttgtaatagcttgactgggatttgtgatgaaaacacccgttgtctcgct
cccttcagcacaaggagttgtgtaataagcacagtcagtttaaaatgtccagaacttggt
tggcaatactggaataggtattgttactttatccttccagctaattggaaaccttggaag
gatgccaatactacctgcagtcggtacagaggtgctgaactcctttggtttgaaagtgtg
gaagaactgacttggataacagaagttgtgtttggagaaacatggacaggattgcaagat
ataaatcaagatggtatctgggcatgggcacatgaagatagtgcatctagtgttttgcca
tggttagtcctaaaaaagaagaaaagacagcgtagatgtgttgaattgacagctgataaa
tacgtgtctgtagcagactgtaacaaagccaaggggtgggtgtgcaagaaggcagcagaa
ccagatcttgacgtgttcatgggcttttgggatacagtaacagtctttccaacattgaca
atatctaataactacactaaccatacactggccagagaacaatgtgtaaagcagaaacgt
gggtgccttggctatatgctttggagagatgcttatttactgatacctaactctgaattg
gttattggtggatttgcacccagtgtcacatacctaaaatcagcttgtaatgttggatac
tatggagtgtcatgtgaacaggaatgctcacgttgctattgggacaggccatgcaatagc
atatctggagagtgtgtggacagtgttgtttgtgctgcaccagaagatgtaggggcctgt
gatttaggcaagtacagcttgaaatgtcctcttggttttggctggtggtacaggaatgga
tggtgctaccttatagaaggcaacagaaatttgagctggatggaagccaggctgttttgt
agccattttaaaggaacaagtctattgaagctggaatcctctgctgaaaaggactggctg
caaaagatgataaaatggcctgtgtggataggaatgaatagggcgacatcagactctgcg
tggcagtggatagatggagcaacagctgacacctggataaaggttcaaggaaatgcaact
gcaaactgcgttgctgtttggtataatgaaacgactttacgaggagttgattgcctttca
aaacacaattttgtgtgtaaaagaagagaatctgaaaatatgtttcagttttatgctggc
cacatcataatgcacagtcagaatgcgattccaaaagtgcactcttcccttaaatctgct
gaaaatgcttgcctgtatgagagaacacactgtactggaatagtctattcaaagaagcag
tatcacttggttggtggaacagaaatatttagaagttcttataaagctgactcattatac
cttaaaactggttgccacccaggttattatggctcagactgtcagtccacatgccgtccg
tgtgacaggggtcttccttgtaacggtgttacaggacactgtgtgggaacttccagtgtt
acttgtagcttacagtctcaagatccacagtgctcccctggagaagtttccaggcagttg
tgcccacaggggcctgagtggcactattttctgaagacgtgttactacatagaagacacc
aaaactaagacatggagtgaagcaagaagagcatgtcagggttttaaagacacggacctt
gctataattacagacaatgtagaaaagacttggatacaatttaaaggagagaacagctgg
ataggtatgacctataagaaagaagattccctgtacatgtgggttgatggcaaacctgca
catgctgaaagtgcatgggtcatcagaacaaacaggagacatatgcttgtcaaagaagac
tgtgtggttgccttcaagcattatttttctcccgcacattgtttctcgctgagaaaatgg
atatgcaaaaggaaggaagttcttaactactttacagtgcatgaggggagagtgttatat
agcccttatgtaccagcatcaaatatttataacaacgtaacggccgccaaagatgcttgc
tcccatctacagaactgcactggagtagtggttgtgggagagcacaacattgtacaaagt
ggaacagaactctataacagcaggaacagaactgtgaaaacccttatcaaatcggattgt
gtctctggaaggtttgggcctctctgtgagcatgagtgcccaccctgccagcagggagtt
tcttgcaatccccacacaggaaagtgtggggatacagtgttttgtactacagagagtagc
agtatcccctgtgaaaaaggttctttgtttggcgggtcatgtcctgttgaagatgaatgg
cagtactggcaaggaagctgttactatatccccagagcaaagaggcaaagctggcagcat
gcaagagacctgtgcaggcgttacagggacacagatcttctgtggctagcacgtccagag
gagaaggaatggctgttctctaaagttcccaaagcatctttctggacaggcctttatggg
gttaggtggtgttcagttttgaagtggtcaaacagtcaaatcccttttgcacgctcagca
tggttgtctctacacaagtggactgtaactgccaagtgctgtgtgcagctgaatgctctg
aagggccatttggcagctgtttactgctttcagaaagccccggggatttgtaagagaaaa
gaagaaggaatgatcgatttccaggaattccaaggatattatgtggttggcacctataca
tcaaactcttcctaccagtcatcactggaagctgtacagctctgtagatttcagcgaagc
acttgcaatgccgttgggacgatcaaaggagaatacagaactatgtttgccacccggctt
ctgctcatcagtggagcccttggagatgaaagtgctgcttatataaaatcggcctgtgcc
tcaggatactatggtccagaatgccagggtagttgcacctgtaataaaattgaaaactgc
aaccctttcactggagaatgtgctgagtacttacagtgttcagagaaatatgtggcacaa
cagtgccaaagaggtgtggtcagtctgaagtgtccagagaaccctgggtggtggtactgg
aatggcaggtgttattatatagaagaaactaatagttcaacctggctagaagcaaagaat
ttctgcactgcctataatggcactgatctccttgtattggacagtgcagaagaagaggcc
tggatcacctctgtgttaaacaaacctgcgtggattgcctcagtggtttccttgcaaagg
gataaggaaaacacgggcaggaagaatcagcatattttggtaagccacaccaaaaatacc
actttgaccgcttgtgatcagctaactgcgaatgggagcttgaaccaaattaactgctca
tcctcagcttcctgggtttgtaagagaaatgaaggtaatggcattttttggaaatacccc
agaatgctgctcctgcagccgctaggaggattaacatacacattcttggaggttgcaatg
tcagcctgtatcatagcagctgattgctctggagtaacttactgggggcaaagttacata
cctgtcagtggtaaagagctgatcttcaacagaaaaagaaatgttgctgtgtacctgaaa
agtgcttgcagtgaaggacggtatggtatgtattgccaacagaagtgcccacgctgtctc
agccatacaacctgcaatagaatcacagggttgtgtgatggtgcagtgacttgtcacgaa
attaagaaattagagctttgtgaatatgaccttacaagcaagatgtgtttccccttttgg
aaatactggaatggaaattgttattatattcctccttttggggcactgaataagagtgga
gcagaatttatgtgtggtcaatacgaagggtcccagctgttaaaattacaagatgcagaa
gaacagaggtggattgctaaagtcatctctaagaaaagctggttactcaagctgagccat
aatctccagtccaaaacctggatcatgcctggtagagacaccgaagtgcctcattggggt
ttccaagaggctcaggatttgtgtattcagattgaacctgtaaatgggaccttgatttca
tctccctgctcagaactggcttcgtggatttgcaaggtcacaccagagggtgtctgcctt
aggctttaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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