KEGG   Alligator mississippiensis (American alligator): 106736991
Entry
106736991         CDS       T03087                                 
Symbol
USP35
Name
(RefSeq) ubiquitin specific peptidase 35
  KO
K11854  ubiquitin carboxyl-terminal hydrolase 35/38 [EC:3.4.19.12]
Organism
amj  Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:amj00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:amj01002]
    106736991 (USP35)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amj04121]
    106736991 (USP35)
Enzymes [BR:amj01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     106736991 (USP35)
Peptidases and inhibitors [BR:amj01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   106736991 (USP35)
Ubiquitin system [BR:amj04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    106736991 (USP35)
SSDB
Motif
Pfam: Usp38-like_N UCH UCH_1 Med16_bridge
Other DBs
NCBI-GeneID: 106736991
NCBI-ProteinID: XP_006272493
Position
Un
AA seq 999 aa
MDKILEAVVMSSYPNNVKQGLVRRVIEAAKQPMDSEQCWSMLELSTKLYLTGDTKYKREI
GKEVLEVYGHYHPEEFEEFFNVRFLLSLLQEGYGPLGKRSHHVLDYIHLGLQFILDSPSA
NDIFSLLKIEVLRKVCERPGPKQCAKIGKLLMQHPQCIPTGKHQVLFCQQLIRCIGQFQC
ISEGEEEIMEFLDHVNKVSGLLQKIWRAQTSAILPSLKELFTIISSTEEQEAPSNALASV
VQYVPLELMDGVIRNLTNDDSITDAQMMTAISRMIDWVSWPLGKNIDKWIIALLKGLAAV
KKFSILIEVTLSKIEKVFSKLLYPIVREGALSVLQYMLLSFQHSHEAFHLLLPHVPRLVA
SLKKEDSNSAMSCLEQLAELIHCMFFRFSGFPDLYEPVLEAVKALPIPNEDRIKHLLGQN
AWTSQKNELACFYPRLASKSETGKIGLINLGNTCYMNSIIQSLFMASDFRHSVLNLTESN
AQPLMTKLQWLFAFLEHSQRPAISPESFLSASWPPWFSPGAQQDCSEYLKYLLDRLHEEE
KTGKRIYQKLKESNLMSQAKENHYLNKTLVEKMFGGKMTTKIRCLKCLNVSSREEAFTDL
SLAFPPIERHGHRPNHTTILPVEEIGPQIIEPPVKPQSQIIDSPGRQRKRHVSGEQPTQL
VQVETLGFQEAGEQEAPIDLRHDPAGREMGKDPLLAFGEQTCSSKDSRSVPDLINYFLSP
EMLTAENKYHCDKCASLQDAEKVAELTEGPHYLILTLLRFSFDLRTMKRKKILDNVSIPL
VLKLPVLVASEEPDDVCPPRQERAASGTGFVSVVYDLCSVVVHSGVSSESGHYYCYSREG
TDTGARAQPRDGAQKATSEKQLDFEIQWYLFNDTRVSFSSFESVSNVTSFFPKDTAYVLF
YQQRPGKQSCTVCEEASDAVQLHGEPSLNKDLMEAISKDNILYLQEQEKEARNRAAYISA
LPKSPLWWRDFDRDKDDEGSSGGCGSAAGGGGSFHGLVF
NT seq 3000 nt   +upstreamnt  +downstreamnt
atggataagatcctggaagctgtggtgatgtcttcataccccaacaatgtgaagcaagga
cttgtgagacgggtcattgaggcagcgaagcagcccatggatagcgagcagtgctggtcc
atgctggagctctccaccaagctttacctcacaggtgacaccaagtacaagagggagatc
ggaaaagaggtgttggaagtttatggccactaccatccggaggagtttgaagagttcttc
aatgtccgtttcctcttgagcctccttcaggagggctatgggcctctggggaaaaggagc
catcatgtgctggattacatccaccttgggctgcagttcatcttggacagcccgtcggct
aatgatattttcagcctcttgaagattgaagtgctccggaaagtctgcgagaggcccgga
cccaagcagtgcgccaagatcggtaaactcctcatgcagcatcctcagtgcatccccacc
ggcaagcaccaggtcttgttctgccagcagttaatacggtgcattgggcagttccagtgc
atctcggagggtgaggaggagatcatggagtttctagaccacgtgaacaaagtgagcgga
ctgctgcagaaaatctggcgagctcagacgtccgccatcctcccatccctgaaagagctc
ttcacgatcatttcttcaacagaggagcaggaagctccatccaatgccttggccagtgtg
gtccagtatgttcctctggagctcatggatggcgtcatcagaaacctaaccaatgatgac
agcataacagatgcacagatgatgacggcgattagtaggatgatcgattgggtctcttgg
cctctagggaagaacatagacaagtggatcattgctctgttgaagggtttggctgcagtg
aagaagttcagcatcttgatcgaagtgactctttccaaaattgaaaaggtcttctccaag
ctgctgtaccccatcgtgagggagggggccctgtctgtcctgcagtacatgctgctgagt
ttccagcactcgcacgaagctttccacttgctgcttcctcacgtcccccggctggtggca
tctctgaagaaggaagattccaactctgcaatgagctgcctggagcagctggccgagctg
atacattgcatgttcttccggttttcgggatttccagatctctacgaaccagtcctggag
gcagtcaaagctctcccgattcccaatgaggaccgaattaaacatttactggggcagaat
gcttggacctcccaaaagaatgagctggcctgtttctatccacgcctagcttccaagtca
gaaacgggaaagattggcttaattaacctggggaacacctgctacatgaacagcatcatc
cagtctcttttcatggcctcagactttagacattcggtactgaatttaacggaaagcaat
gcacagcccctgatgacaaagctccagtggctctttgcatttctggagcacagtcagcga
cctgccatctcacctgaaagtttcctctcggcatcctggcctccgtggttcagccctggt
gctcagcaggactgctccgaatacctgaagtatctgctggatcgactgcatgaagaagag
aaaactgggaaaagaatttaccaaaagctcaaagagtctaacttgatgtctcaggccaag
gagaatcactacttaaacaagaccttagttgagaaaatgtttgggggtaaaatgaccacc
aaaattcgctgtctgaagtgtttgaatgtctcctcccgagaagaagccttcacagacctg
tccttggctttcccgccaattgaaaggcacggacacaggccaaaccacaccactattttg
ccagtggaagaaatcggtccccagattatagagccacctgtaaaaccccagagccagata
atagactctcctgggagacagaggaagcgtcatgtgtctggagagcaacccacgcagcta
gtgcaggtggaaacgctgggcttccaggaagcaggggagcaagaggctcctattgacttg
agacatgatcctgctggtagggagatggggaaagatccactcttggcttttggagagcag
acatgtagttccaaggactccagatctgtcccggacttgatcaactatttcttatctcca
gagatgctgacagcagagaataaataccattgtgacaagtgtgcttccttacaagatgca
gagaaagtggctgagttgacagaagggcctcactaccttattctcaccctgctgaggttc
tctttcgacctgaggaccatgaagaggaagaagatcttggataatgtctcgataccgctg
gtgctgaagctacctgttctggttgcgtcagaggaaccggatgatgtttgccctcccagg
caggagagggctgcatcaggcactggctttgtgtctgtggtgtatgacctctgcagtgtg
gtggttcattctggtgtctcctctgagagtgggcactactactgctactcccgggagggt
actgatacaggtgccagggcacagccacgggatggggctcagaaagccacctctgaaaag
cagctggactttgaaatccagtggtacctctttaatgacaccagagtctccttctcctcc
tttgaatctgttagcaatgtgacctctttcttccccaaagacactgcctatgtgctcttc
taccagcagaggccaggcaagcagagctgcacggtgtgcgaggaggcttcggatgctgtc
cagctgcacggggaaccctcactcaataaagacttgatggaagccatttccaaagacaac
atcctgtatttgcaggaacaagaaaaggaagcaagaaacagagctgcctacatctcagcc
ttgcccaagtcacccctgtggtggagagactttgacagggacaaggatgatgaaggctcc
tcagggggctgcggctccgctgctggaggtggaggctcgtttcatggcctcgtcttctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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