KEGG   Alteromonas macleodii Black Sea 11: AMBLS11_00265Help
Entry
AMBLS11_00265     CDS       T02260                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
amk  Alteromonas macleodii Black Sea 11
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:amk00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    AMBLS11_00265
Enzymes [BR:amk01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     AMBLS11_00265
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AMBLS11_00265
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
63174..63983
Genome map
AA seq 269 aa AA seqDB search
MPELPEVEVSRLGVSPHLIGNTITQVVVRERRMRWPIPQEVSNVEGQTVTAVKRRAKYLL
IETATGTLILHLGMSGKLRVIDASTPTIKHDHVDIVLNTGKCLRFNDPRRFGAVLFQAPN
TQVAMLDNLGPEPLTDDFDDKRLFNMSRNRKGPVKNFIMDNAIVVGVGNIYANEALFLAG
IDPRRAAGNISAARYKSLTATIKQVLAKAIEQGGTTLKDFAQTDGKPGYFAQHLNVYGRK
GEPCEVCGKAIESKVIGQRNTFFCTHCQR
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactaccagaagttgaagtaagccgtttgggcgtatctccacatcttattggc
aataccattacccaagtagtggtgcgtgagcgtaggatgcgctggccaataccacaagag
gtgtcaaacgttgaagggcagactgttacagcagttaaacgccgcgccaaatatttactt
attgaaactgccacaggtacgctaattttacacttaggcatgtcgggtaaactacgcgta
atcgatgcgtctacaccgactatcaaacatgaccacgtagacattgttctaaacacaggt
aagtgtttacgttttaacgaccctcggcgcttcggagcggtattatttcaagcgcctaat
acgcaagttgccatgcttgataatttaggcccagaaccgcttacagacgactttgatgat
aagcgtttgttcaatatgtcgcgcaatcgaaaaggccctgttaaaaacttcattatggac
aatgccattgtggtaggggtaggaaatatctacgcgaacgaagcactgtttttagctggt
atagacccgcgaagagccgcaggaaatattagtgcagcgcgctacaaatcactaaccgct
actattaaacaagtattggcgaaagcgattgagcaaggtggtacaacactcaaagatttt
gcacaaactgacggtaagcctggttactttgcgcaacacctaaatgtatatggaagaaaa
ggcgagccttgtgaagtgtgtggcaaagctattgaaagtaaggttatcgggcagcgaaat
acctttttctgtactcactgccaacgttaa

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