KEGG   Ailuropoda melanoleuca (giant panda): 100463887
Entry
100463887         CDS       T01329                                 
Symbol
COL17A1
Name
(RefSeq) collagen alpha-1(XVII) chain isoform X1
  KO
K07603  collagen type XVII alpha
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    100463887 (COL17A1)
SSDB
Motif
Pfam: Collagen DUF2868
Other DBs
NCBI-GeneID: 100463887
NCBI-ProteinID: XP_019665115
Position
6:complement(104905945..104956480)
AA seq 1478 aa
MDVTKKNKRDGTEVTERIITETVTTRLTSLPPKGGTSNGYAKTGSLGGGSRLEKHSLTHG
SSGYINSSGSTRGNASTSSYRRAHSPASTLPNSPGSTFERKTHITRHGTYEGSSSGNSSP
EYPRKEFASSSTRGRSQTRESEIRVRLQSASPSTRWTELDDVKRLLKGSRSASVSPTRNS
SNTLPIPKKGMVETKMVTASSQSVSGTYDATILDANLPSHMWSSTLPAGSSMGTYHNNVT
TQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGVSTCSSVFGVQNNLAPSSSTLSHSTA
TASAAYGVKKNLPQSPAAVSTGVSTSAACTTNVQSDDLLHKDCKFLILEKDNTPAKKEME
LLIMTKDSGKVFTASPASITATSFSDDTLKKEKQAAYTTDTCLVSEANGDVKTVSTKGKA
ASAEIHNYKHRGVGGVGGSGGGGGGGGPWGAAPAWCPCGSCCSWWKWLLGLLLTWLLLLG
LLFGLIALAEEVRALKARVAALEQSRGGVLLYKDTVERASKDRLQGAAPGAGAGAGKLGL
DGHSQEELWLFVRDRLMAEQESGNLRGSPGPKGDMGSQGPKGDRGLPGTPGIPGLLGHPG
PEGPKGQKGSVGEPGMEGPMGQRGREGPMGPRGEPGPPGFGEKGDRGAAGEPGVQGPPGV
PGSVGPKGSSGSPGPRGLPGPIGSQGLRGEVGLPGIKGDKGPLGSPGPKGDQGEKGPRGL
TGEPGMRGLPGAVGEPGAKGSVGPAGPDGHQGPRGEQGLMGMPGTRGPQGPSGDPGKPGL
TGPQGPQGLPGSPGRPGVKGEPGAPGRIMTSEGSSTITVPGPPGPPGAMGPPGPPGAPGP
VGPAGLPGQQGPRGERGLAGESFMGSSSSISEFLSAQGLDLRGPPGPPGPPGPPGEGLPG
PPGPPGSFLTNSETFFSGPPGPPGPKGDPGPPGPRGHQGEQGLPGFSASGSGSLGLNLQG
PPGPQGPKGDKGDPGVPGAPGIPGGLSQGGSSSSTMFMPGPPGPPGPPGPPGSISSSGRE
IQQYISEYMQSDSIRSYLSGVQGPPGPPGPPGPVTTIAGETFDYSELASRVGSYLQTSGY
SISSSISSEDIVAVLKRDDVRQYLRQYVIGDWSLQSLDYAELSSRILSYMSSSGISIGLP
GPPGPPGLPGTSYEELLSLLQGSEYRGIIGPPGPPGPPGIPGNVWSSISVEDLSSYLHTA
GVSSIPGPPGPPGPPGPRGPPGVSGALATYAAENSDSFRSELISYLTSPDVRSFIVGPPG
PPGPQGPPGDSRLVSMDGSYSRGSRSSSHSASVSRDSSYSSSMGIGGSSGGSLGEGGAFG
LDMGLGRGYGGAAEGGMYGGEGGPFGAGFAGGLDYNELAVRVSESLQRQGLLQGMAYTVQ
GPPGRPGPQGPPGISKVFSAYSNVTEDLMDFFRTYGAIPGPPGQKGEVGTPGPKGERGPT
GPPGRPGPPGPRGHKGEKGDKGDQVYAGRRKRSIALKP
NT seq 4437 nt   +upstreamnt  +downstreamnt
atggatgtaaccaagaaaaacaaacgagatggcaccgaggtcactgaaagaattatcacg
gaaacagtaactacaagacttacatctttaccgccaaaagggggaaccagcaacggctat
gctaaaacaggctctcttggtggagggagccggctggagaagcacagcctgacccatggc
agcagtgggtacataaactcgagtgggagcactcgaggcaacgcctccacgtccagttac
aggagggctcactcccctgcctccactctgcccaactcaccgggctccacctttgaaagg
aaaactcacatcacccgccacggaacatacgaagggagctccagtggcaactcttctccg
gagtaccctcggaaggagttcgcatcttcttcaactagaggaaggagccaaacacgagaa
agtgaaatccgagtccgactgcagagcgcgtccccttctacccgatggacggaattggat
gatgttaagcgtctgctcaaggggagccgctcagccagcgtgagccccacccggaactcc
tccaacaccctccccatccccaagaaaggcatggtggagaccaaaatggtgacggccagc
tcccagtcggtgtccggcacctatgatgccaccatcttggacgccaaccttccctcccac
atgtggtcttccaccttgccggccgggtcctccatggggacctatcacaacaacgtgaca
acccagagctcgtccctcctcaacaccaacgcctattctgcaggatccgtcttcggagtt
ccaaacaacatggcatcctgctctcccacgctgcaccccggggtcagcacctgctcctca
gtgttcggcgtgcagaacaacctggcacccagctcatccaccctgtcccacagcacggcc
accgcctccgcagcgtatggtgtgaagaagaacctgccccagagccccgccgccgtgagc
actggcgtgtccacctctgcggcctgtaccacaaatgtccagagtgatgatctcctgcac
aaggactgcaaattcctgatcctggagaaagacaacacgccggccaagaaggagatggaa
ctgctgatcatgaccaaggacagcgggaaggtcttcactgcttccccggccagcatcact
gcaacttctttttcagatgataccctcaagaaggaaaagcaagctgcctacactacggac
acgtgcctggtgtcagaagctaacggagatgtgaagactgtgtccaccaagggcaaggcc
gcctctgcagaaatccacaactacaagcaccggggcgttggcggtgtaggcggcagcggc
ggcggcgggggcggcgggggcccgtggggggcggcgccagcttggtgcccctgcggctcc
tgctgcagctggtggaagtggctgctgggcctgctgctcacctggctgctgctcctgggg
ctgctctttggcctcatcgctctagcggaggaagtacgggcgctgaaagcgcgggtggcc
gcgctggagcagagccggggcggcgtgctgctttacaaggacacggtggagcgcgccagc
aaggaccggctgcagggcgctgccccgggcgcgggagcaggcgcggggaagctggggctg
gacggccacagtcaggaggaactctggctgttcgtgagggacaggctgatggcagaacaa
gaaagcggaaatctccgaggaagccccggcccgaaaggtgacatgggaagtcaaggccct
aaaggtgaccgaggtctccctgggactccaggcatccctgggctcttgggccacccgggt
ccggaaggaccaaagggacaaaaaggcagtgtgggagagccgggcatggagggacccatg
ggccagagagggcgagaaggtcccatgggacctcgcggtgaaccagggcctcctgggttt
ggagagaaaggagacagaggggctgctggtgaacccggtgttcagggcccacccggcgtc
ccaggttctgtgggtcccaaaggttccagtggttctcctggcccacggggtctcccaggc
cctataggttcccaagggctccgaggtgaagttggactccctggtatcaaaggtgacaaa
ggccctctggggtcaccaggacccaaaggtgaccagggagagaaaggaccccgaggcctc
acaggtgagccgggcatgagaggcttgcctggtgctgtgggtgagcctggagctaaagga
tcagtaggacccgctggccccgacggacaccagggtccaagaggtgaacaaggtctgatg
gggatgcctggaacccgcggcccgcaagggccttctggagacccaggaaagccaggtctc
acaggacctcagggacctcagggacttcctggcagccccggccgcccaggagttaaaggt
gaacccggagctccaggcaggatcatgacttcagaggggtcatcaacgatcactgtccca
ggccccccggggcctcctggagccatgggaccaccgggccctccaggtgccccaggtcct
gtgggtccagctggtctccctggacagcaaggcccacgcggggagcgaggacttgctgga
gaatcattcatgggcagcagcagctccatctctgagttcctctctgcccaaggtcttgat
ttacgaggtcccccaggcccacctggaccacctgggcctccaggagaaggcctgccaggc
ccaccaggcccaccgggatctttcctgaccaactcagagaccttcttctctggcccccct
ggccccccaggccccaagggagacccaggccccccaggcccccgaggacaccaaggcgag
caaggcctcccagggttctctgcctcaggttccggttctctcggactcaacctgcaggga
ccacctggcccccagggacccaaaggggacaaaggtgatcctggggtcccaggggctcct
ggcattcctggtggtctttctcaagggggatcatcatcgagcaccatgttcatgccgggc
cccccaggccccccaggccccccaggccctccaggctccatcagcagctctggccgggag
atccagcagtacatctctgagtatatgcagagcgacagcattcggtcctatctctctgga
gttcagggtccccctggaccacccggtcccccaggacctgtcaccaccatcgcgggggag
actttcgactattcagagctggcaagccgcgtcgggagctacttacagacctcggggtac
agcatcagctcctccatctcttctgaggacatcgtggctgtgctgaagcgggatgacgtg
agacagtacctgcgtcagtatgtgattggagattggtccctccagtctttggactacgcg
gagctgagcagtcgcattctcagctacatgtccagctctggaatcagcattgggcttcct
ggccccccgggaccccctggcttgccagggacatcctacgaggagctcctctccttgctt
caggggtctgaatacagaggcatcattgggcccccaggtccccctgggcccccaggtatc
ccaggcaacgtgtggtccagcattagcgtggaggacctctcttcctacctgcacactgca
ggcgtgtcgtctatccccggccctccgggccctcctggtcctccaggccctcgagggcct
ccgggtgtctcgggagctctagcaacctatgcagccgaaaacagtgacagcttccggagt
gaactgatcagctacctcacaagcccagatgtgcggagcttcatcgtgggcccaccaggc
cctccagggccccaggggccgcccggggacagccgcctcgtgtccatggatggctcctac
agccggggcagcaggtcctcctctcacagcgcgtcggtcagtcgggactcctcctacagc
tcttccatgggcataggaggatccagtggaggctcccttggtgaagggggggcctttggc
ctggacatgggcctgggccgaggctacgggggagcagcagaaggtggcatgtacggtggt
gaaggtggaccgttcggggctggctttgccggaggtctagactacaacgagctggctgtt
cgggtgtctgagagcttgcagcgtcagggcctgctgcaagggatggcctacactgtccag
ggcccaccgggccggccagggccccagggcccccccggcatcagcaaggtcttctctgcc
tacagcaacgtgactgaggacctcatggactttttccgaacttatggagccattccaggc
ccccctgggcagaaaggagaggtgggcaccccaggacccaaaggtgagaggggacccaca
ggaccaccaggtcggcctgggccacccggccctcgagggcacaaaggagaaaaaggagac
aaaggtgaccaagtctatgcagggcggagaaagagaagcatcgccctcaagccatga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (40)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (2)   
   Pfam (2)   
All databases (53)   

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