KEGG   Ailuropoda melanoleuca (giant panda): 100465724Help
Entry
100465724         CDS       T01329                                 

Gene name
THBS1
Definition
thrombospondin 1
Orthology
K16857  
thrombospondin 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
Rap1 signaling pathway
p53 signaling pathway
Phagosome
PI3K-Akt signaling pathway
TGF-beta signaling pathway
Focal adhesion
ECM-receptor interaction
Malaria
Proteoglycans in cancer
MicroRNAs in cancer
Bladder cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 Environmental Information Processing
  Signal transduction
   04015 Rap1 signaling pathway
    100465724 (THBS1)
   04350 TGF-beta signaling pathway
    100465724 (THBS1)
   04151 PI3K-Akt signaling pathway
    100465724 (THBS1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100465724 (THBS1)
 Cellular Processes
  Transport and catabolism
   04145 Phagosome
    100465724 (THBS1)
  Cell growth and death
   04115 p53 signaling pathway
    100465724 (THBS1)
  Cell communication
   04510 Focal adhesion
    100465724 (THBS1)
 Human Diseases
  Cancers
   05206 MicroRNAs in cancer
    100465724 (THBS1)
   05205 Proteoglycans in cancer
    100465724 (THBS1)
   05219 Bladder cancer
    100465724 (THBS1)
  Infectious diseases
   05144 Malaria
    100465724 (THBS1)
Heparan sulfate/heparin binding proteins [BR:aml00536]
 Extracellular matrix molecules (General comment) Storage depot, cell adhesion and motility, ECM/barrier formation
  100465724 (THBS1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Position
Un
AA seq 1170 aa AA seqDB search
MGLAWGLSVLFLLHACGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR
IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAIERKDHSGQVFSVV
SNGKAGTLDLSLTVQGMQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD
VPIQSIFTRDLASVARLRIAKGGVNDHFQGVLQNVRFVFGTTPEAILRNKGCSSSTNVLL
TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK
VTEENKELAIELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN
ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQT
RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE
TKACTKDACPINGGWGPWSLWDLCSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDTTERQT
CNKQDCPIDGCLSNPCFAGVKCTSYADGSWKCGACPPGYSGNGVQCEDVDECKEVPDACF
NHNGEHRCENTDPGYNCLPCPPRFTGPQPFGRGVDYATANKQVCKPRNPCTDGTHDCNKN
AKCSYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN
LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN
HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH
NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN
DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENIDISETDFRRF
QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD
DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL
WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD
KTYAGGRLGLFVFSQEMVFFSDLKYECRDS
NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt
atggggctggcctggggactcagtgtcctattcctgttgcatgcgtgtggttccagccgc
attccagagtctgggggagacaacagcgtgttcgacatctttgaactcaccggggctgcc
cgtaagggctctgggcgccgactggtgaagggtcctgacccttccagcccagctttccgc
atcgaggatgccaacctaatcccccctgtgcctgatgacaagttccaagacctagtggat
gccgtgcgggcagagaaaggcttccttctcttggcctccctgaggcagatgaagaagacc
cgaggcactctgctggccatagaacggaaggaccactcgggccaggtcttcagtgtggtc
tccaatggcaaagcgggcaccctggacctgagcctgaccgtgcaggggatgcagcatgtg
gtgtcagtggaggaggcgctcctggccaccggccagtggaagagcatcaccctgttcgtg
caggaggaccgggcccagctgtacatcgactgtgagaagatggagaacgcagagctggat
gtccccatccagagcatcttcaccagggacctggccagcgtggccagactccgcattgcc
aaaggaggggtcaatgaccatttccagggggtgctgcagaacgtgaggtttgtcttcgga
accacaccagaagccatcctcaggaacaaaggctgctccagctcgaccaatgtccttctt
accctagacaacaatgtggtaaacggctccagccctgccatccgcactaactacatcggc
cacaagacgaaggatctgcaagccatctgcggcatctcttgtgacgagctgtccagcatg
gtcctggagttgaggggcctgcgcaccattgtcaccacactccaggacagcattcgcaaa
gtgactgaagagaacaaagagttggccattgagctgaggaggcctccactctgctaccac
aatggagttcagtacaggaataatgaggaatggactgttgatagctgcacggagtgccgc
tgtcagaactctgttaccatctgtaagaaagtgtcctgccccatcatgccctgctccaac
gccacagtccccgatggagaatgctgcccacggtgttggcccagcgactctgcggatgac
ggctggtccccgtggtctgagtggacctcctgctctgcgacctgtggcaatggaatccag
cagcgcggtcgctcctgtgacagtctcaacaaccgatgtgagggctcctccgtccagacg
cggacctgccacattcaggagtgcgataagagatttaaacaggatggcggctggagccac
tggtccccgtggtcatcttgttccgtgacctgcggcgatggtgtgatcacaagaattcga
ctctgcaattctccgagcccccagatgaacgggaaaccatgtgaaggcgaagcccgcgag
accaaagcctgcacaaaagacgcctgccccatcaacggaggctggggtccctggtcactg
tgggacctctgttctgtcacctgcggaggaggggtgcagaaacgtagccggctctgcaac
aaccccacaccccagtttggaggcaaggactgtgtcggtgacacgacagaaagacagacc
tgcaacaagcaggactgtccgattgacggatgcctgtccaatccctgctttgccggggtc
aagtgtacgagttacgcagatggcagctggaaatgcggtgcctgtcccccgggctacagc
ggaaacggcgtccagtgcgaagatgtggatgagtgcaaagaagtacccgacgcctgcttc
aaccacaacggcgagcacaggtgtgagaacaccgaccccggctacaactgccttccctgc
ccgcctcgcttcacgggcccgcagcccttcggccggggtgtggactacgccaccgccaac
aaacaggtgtgcaagccgcgcaacccctgcacggacgggacgcacgactgcaacaagaac
gccaagtgcagctacctgggccactacagcgaccccatgtaccgctgcgagtgcaagccc
ggctacgcgggcaacggcatcatctgcggggaggacacggacctggacggatggcccaac
gaggacctggtgtgcgtggccaatgccacctaccactgcaaaaaggataactgccccaat
ctgcccaactccgggcaggaggactacgacaaggatggaatcggcgacgcctgtgatgac
gacgatgacaatgataaaatcccagacgacagggacaactgcccattccattacaaccca
gcccagtatgactacgaccgagatgatgtgggagaccgctgtgacaactgcccctacaac
cacaaccccgatcaggctgacacggacaacaacggggaaggagacgcctgcgccgcagac
atcgatggggacggtatcctcaatgaacgagacaactgccaatatgtctacaatgtggac
cagagggacacagatatggatggggttggagatcagtgtgacaactgccccctggaacac
aatccagatcagctcgattctgactcagaccgcattggagacacgtgtgacaacaatcag
gatattgatgaagacggccaccagaacaacctggacaactgtccctatgtgcccaatgct
aaccaggctgaccacgacaaagatggcaagggagatgcctgtgaccatgatgatgacaat
gatggcattcctgatgacagggacaactgccgactcgtgcccaaccctgaccagaaggat
tctgatggtgatggtcgaggtgatgcttgcaaagacgattttgaccatgacaatgtgcca
gacattgatgacatctgtcctgaaaacattgatatcagcgagactgatttccgccgattc
cagatgattcctctagatcccaaagggacatcccagaacgaccctaactgggtcgtacgc
catcagggtaaagaactcgtccagaccgtcaactgtgaccctggacttgctgtaggttac
gatgagtttaatgccgtggacttcagtggcaccttcttcatcaacacggaaagggatgac
gactatgctggatttgtgttcggctaccagtctagcagccgcttttatgtcgtgatgtgg
aagcaagtcacccagtcctactgggacaccaaccccactagggctcagggatactcaggc
ctttctgtgaaagttgtgaactctaccaccgggccaggcgagcacctgcggaatgccctg
tggcacacgggaaacacccctggccaggttcgtactttgtggcatgaccctcgtcacata
ggctggaaagatttcactgcctacagatggcgtctcagccaccggcccaagacgggtttc
attagagtggtgatgtacgaagggaagaaaatcatggctgactcaggacccatctatgac
aaaacctatgctggtggtaggctagggttgtttgtcttctcgcaagaaatggtgttcttc
tccgacctgaaatacgaatgcagagattcctaa

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