KEGG   Ailuropoda melanoleuca (giant panda): 100466651Help
Entry
100466651         CDS       T01329                                 

Gene name
USP42
Definition
ubiquitin specific peptidase 42
Orthology
K11855  
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
Enzymes [BR:aml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100466651 (USP42)
Peptidases [BR:aml01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100466651 (USP42)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
Ensembl: 
Position
Un
AA seq 1186 aa AA seqDB search
MNFNTGHAEGFCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFL
QYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITL
EIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFAN
FTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGL
WYQMNDSIVSTSDIRSVLSQQAYVLFYIRSHDVKNGGEITHSTHSPGQSSPRPVISQRVV
NNKQAASGFIGPQLPSHMIKNPPHLNGTGPLKEAPSSSMSSPSGNSSVSRAGSVNASTSV
PNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQSQPNLHSGSLENPTKPVPSSTVTNSS
AIQSTSSAPTTAVSSKVTKQMTPSESCSKPVMNGKSKLSSSVLVPYGAESSEESDEEAKG
LGKENGLGTIESSNSSVQDAEDDESSLLELREPLALNGADSTDSDLKENGLSCDGASCQV
PPALHSENPFSKANGLPGKLMPAPLPLLPEDKILETFKLSSKAKGSTEETSAPGTEEGPA
GDPGAELEAGSPSPKSREKLETLTSLSSKLKALPPLDPSVKSTKEEVSENILARPEESLP
SANTLCNSTKNTTGADPLPKLCDPGDLTDDQSRPPQAVSGALTESPRASAAVETAGSSSP
SPPVHPEGACEHELLVCVSRDTCLDLEDPPGGTGMAAEDSPSPQVDEITEDHSEGGPEQS
NGEKCEENKVGQKVPDHSPVKEKISILRKVDRGHYRNRRERSSSGERARESGSQTAEHYH
RKRHSSVRERAGQERYRTQHCNGGQPHPCPSQRLSPGEHRSLGRYSRHHSRSRGASDREW
GRYHHSESEHSWGREKHYPDRLRWDKCRYYHDRYAPYTAREAREWKPFHGPREYAKAGPY
GGRPYKDYYRGRQGYEPADRHHFGSPRAGPPHALLPYPEKYPHEKIALVAEDTNCNLADR
FHEHENAKSRKRRYDSVENSDGHVEKKAWRGFQKDPLEEPKVKKHKKSKKKKKSKDKHRG
RDSRHQQDSDLSVACSDADLHRHKKKKKKKKRHSRKSEDFAKDLEPHLPKAASRETVDRF
RRTDGAFPLTDGLPLEGVGPFREKRKHLRMGSRDDRCPLSECGQGD
NT seq 3561 nt NT seq  +upstreamnt  +downstreamnt
atgaattttaacacaggtcatgcagaaggattttgtatgatgtgtacaatgcaagcacat
atcacccaggcactcagtaatcctggggatgttattaagccgatgtttgtcattaatgag
atgcggcgtatagctaggcacttccgctttggaaaccaagaagatgcccacgaatttctt
cagtacactgttgatgctatgcagaaagcatgcttgaatggcagcaataaattggacaga
cacacccaggctaccacccttgtttgtcagatatttggaggatacctaagatctagagtc
aagtgtttaaattgcaaaggtgtctcagatacattcgatccatatctcgatataacgttg
gagataaaggccgctcaaagtgtgaacaaggcattggagcagtttgtgaagccagagcag
ctcgacggggaaaactcttacaagtgcagcaagtgtaaaaagatggttccagcttcaaag
aggttcactatacacagatcctctaatgttcttacactttctctgaaacgttttgcaaat
tttactggtggaaaaattgctaaggatgtgaaataccctgaataccttgatattcgacca
tacatgtctcagccgaatggagaaccgatcatctatgtcctgtacgcggtgctcgtgcac
actggctttaactgccatgccggccactacttctgctacatcaaagctagcaatggcctc
tggtatcagatgaatgactccatcgtgtccaccagtgatattagatcggtgctcagtcaa
caagcttatgttctcttttatatcaggtcccacgatgtgaaaaatggaggtgaaatcact
cattccactcacagtcccggccagtcctcgccccgacccgtgatcagccagcgcgttgtc
aacaacaaacaggctgcgtcagggtttatcggaccacagctcccctctcacatgataaag
aacccacctcacttaaatgggaccggaccattgaaagaagcaccaagcagttccatgtca
agtcctagtggaaattccagtgtcagccgggctggttctgttaatgcttcgacttctgtt
ccaaactggtccgttaacaggccctcagtgattccagaacatcccaagaaacaaaaaatc
acgatcagtattcacaacaagttacctgttcgtcaaggccagtcccagcctaaccttcac
agcggttctttggagaaccccaccaagcctgttccctcttctaccgttaccaattcttct
gcaatacagtctacctcgagcgcacctacgacggcagtttccagtaaagtcacaaagcag
atgaccccgagcgagtcctgctctaagcccgtgatgaacggcaagtccaagctgagctcc
agcgtcctggtgccctacggcgccgagtcgtccgaggagtctgacgaggaggcgaagggc
ctgggcaaggagaacggtctcggtacgatcgagagctcgaactcttctgtgcaggatgca
gaggatgacgagtcctctctgctcgagctccgagagccccttgctctaaatggtgctgat
agtacagacagtgacctgaaggaaaacggtctgtcttgtgacggtgccagttgccaagtc
ccgcctgctctacactcagaaaatcccttttctaaggcgaacggtctgcccggaaagttg
atgcctgctcctctgccgctcctcccagaagacaaaatcttagagaccttcaaactcagc
agcaaggcaaaaggctcgacagaagaaaccagcgcacctggaacagaggaaggtcctgca
ggggaccccggcgcagagctggaggctggcagtccctctcccaagtcccgagagaagctg
gagaccctcacgagccttagcagcaagttgaaggctctgccgcccttagaccccagcgtc
aaatctaccaaagaagaagtctccgagaacattttagcaagacccgaggagtctttgccc
agtgccaacactctttgcaacagcactaaaaataccacgggggccgatccactccctaaa
ctgtgtgaccccggggatttaacggatgaccagagcagaccaccgcaggccgtatcgggg
gcgttaacagagagcccacgggcctcggccgcagtggagacagcggggagctcgagccca
agccccccggtacatcccgagggtgcctgtgagcacgaactcttggtctgcgtcagtcga
gacacgtgcctggacttggaggaccctcctgggggcacaggcatggctgccgaggactcg
ccctcccctcaagtagacgagatcacagaagatcattcagaagggggccccgagcaaagt
aacggggagaaatgtgaagaaaataaggttggacaaaaagttccagatcattctccagtt
aaggaaaaaatcagtatcctcagaaaagttgatcgaggacattatcgcaaccgaagagag
cgttcgtccagtggcgaacgcgcgcgggagagcgggagccagaccgcggaacactaccac
cgaaagcggcactcatccgtgcgggagcgggccgggcaggagcgctacaggacgcagcac
tgcaacgggggccagccccacccctgtcccagccagaggctcagccccggcgagcaccgc
tccctgggcaggtacagccgccaccactcccgcagcagaggcgcgtcggacagggagtgg
ggcaggtaccaccactccgaaagcgagcactcctggggccgggagaagcactacccggac
agactgcggtgggacaaatgcaggtattaccacgacaggtacgccccgtacacggccagg
gaggcgcgcgagtggaagcccttccacggcccccgcgagtacgccaaggcgggcccgtac
ggcggccggccctacaaggactactacagaggcaggcagggctacgagccggccgaccgg
caccacttcggcagcccccgggcaggcccgccccacgccctcctcccgtaccccgagaag
tacccccacgagaaaattgcacttgtagccgaagacaccaattgtaacctcgccgatcgg
tttcacgaacacgagaatgccaagtcccggaaacggaggtacgacagtgtggagaacagt
gatggtcacgtcgagaagaaggcctggaggggcttccagaaggatcccttggaagagcct
aaagtgaagaagcacaaaaaatcaaagaagaaaaagaaatccaaagacaaacaccgaggc
cgagattccaggcatcagcaggattccgatctttcagtagcatgctctgatgctgacctc
cacagacacaaaaaaaagaagaagaaaaagaagaggcactccaggaaatccgaggacttt
gctaaggacttagaaccgcacctacccaaggccgccagccgtgagactgttgaccgtttc
cggagaacggacggcgccttccccctcaccgatggcctgcctctggaaggtgttgggccc
ttccgtgagaagagaaaacacttaaggatgggaagcagggatgacaggtgtcctctgtct
gagtgtggccagggtgattga

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