KEGG   Ailuropoda melanoleuca (giant panda): 100466696
Entry
100466696         CDS       T01329                                 
Symbol
ATRX
Name
(RefSeq) transcriptional regulator ATRX isoform X3
  KO
K10779  transcriptional regulator ATRX
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04110  Cell cycle
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    100466696 (ATRX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100466696 (ATRX)
   03036 Chromosome and associated proteins [BR:aml03036]
    100466696 (ATRX)
Transcription factors [BR:aml03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    100466696 (ATRX)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    100466696 (ATRX)
SSDB
Motif
Pfam: SNF2-rel_dom ADD_ATRX Helicase_C
Other DBs
NCBI-GeneID: 100466696
NCBI-ProteinID: XP_002928805
Ensembl: ENSAMEG00000001904
UniProt: G1L592
Position
X:complement(56592025..56902823)
AA seq 2488 aa
MTAEPMSESKLNTLVQKLHDFLAHSSEDSEETSSPPRLVMNQSTEKVSGSGNNSDMMENS
KEEGASSSEKSKSSGSSRSKRKPSVVTKYVESDDEKPLDETVNEDASNENSENDITMQSL
PKGTVIVQPEPVLNEDKDDFKGPEFRSRSKMKTENLKKRGEDGLHGIVSCTACGQQVNHF
QKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLICCDFCHNAFCK
KCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVTACNSVFENLEQLLQQNKKKIKVD
NEKSNKAYDHAPRFSPKKNSSSCNGEEKKLDDSCSGSVTYSYSALIVPKEMIKKAKKLIE
TTTNMNSSYIKFLKQAADNSETNSATKLRQLKAFKSVLADIKKAHLALEEDLNSEIQALD
AVNKEKSTKEHKVIDAKSETKVRKGEKPCALERKDISKSEVKLARKQVDSEHMDQSITVQ
EQRANKSASGEHKKSDKKEEPQYEPANTSEDLDMDIVSVPSSVPEDIFENLETAMEVQSS
ADNQGDGNSGTEQELESSSVKLNITSKDNRGSIKSKTTAKVTKELYVKLTPVSLSNSPIK
GADFQEVPQDKDGYKSSGLNPKPENCGLGQEKNDNEHLFESEVPLLSEESDLRRSPRVKT
TPLRRQTETNPATSNSDEESNETVKEKQKLSVPMRKKDKRNSSDSAIDNPKPNKFPKSKQ
SEIVDQNSDSDEMLAILKEVSRMSHSSSSDTDVNETHTNHEKTLYDLKSQTGKDDKGKRK
RKSSTSGSDYDIKKGKSAKRSIISKKKRQNQSESSNYDSELEKEIKSMSKIGAARTTRKR
VPNKEDYDSSEDEKHRKKGMDNQGQKNVKTAQEGSPDDAERKQERENFSSVEGPVDKDRT
NMDLRDRISKKQQSGVSSDGADKLPSGKEESSNSPEDKKVAETKEKSKHLKTKSCKKVQA
GLSDMADNFPKKEQSDESSEDDKKQSKKGTEVKEKKTMDLKKNVIKIEQQYESSSDSTEK
LPEGEEISRFPKGMKQNKNDTTYGEKKSKKIKDKTSKKKDEVSDNAEKLQGKRDSCDSSE
DKRSKNGASSRVKKRCNLPEKSSRKKQDCSSSDTEKYSMKEDGCDSSDKRLKRIELRERR
NLNSKRNTKEIHSGSSSSDGEESSEDNKKLKKQRTSAKKKTVSVKEKMRNSLRTSTKRKQ
ADITSSSSSDIGDDDQNSVGEGSSDEQKIKPVTENLVLSSHTGFCQSSGDEALSKSVPVT
VDDDDDDNDPENRIAKKMLLEEIKANLSSDEDGSSDDEPEEGKKRTGKHNEENPGDEEAK
NQVNSESDSDSEESKKPRYRHRLLRHKLTVSDGESGEEKKMKPKEHKEAKGRNRRKVSSE
DSEDSDFQESGVSEEVSESEDEQRPRTRSAKKAELEENQRSYKQKKKRRRIKVQEDSSSE
NKSNSEEDKEEEEEEEEDEDENDDSKSPGKGRKKIRKILKDDKLRTETQNALKEEEERRK
RIAEREREREKLREVIEIEDASPTKCPITTKLVLDEDEETKEPLVQVHRNMVIKLKPHQV
DGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKTLQVVSFLHTVLLCDKLDFSTALVV
CPLNTALNWMNEFEKWQEGLKDDEKLEVSELATVKRPQERSYMLQRWQEDGGVMIIGYEM
YRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCDEGHILKNEASAVSKAMNSIRSRRRII
LTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADSTMVDVRVMKKRAH
ILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRMTPIQCKLYQYYLDHLTGVGNSSEGGR
GKAGAKLFQDFQMLSRIWTHPWCLQLDYISKENKGYFDEDSMDEFIASDSDETSMSLSSD
DYTKKKKTKGKKGKKDSSSSGSGSDNDVEVIKVWNSRSRGGGEGNVDETGSNPSVSLKLE
ESKATSSSNPSSPAPDWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSL
ISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFND
ETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYR
FLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDPNSEKKK
KRDTPMLPKDTILAELLQIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEYEAEKKG
LTMRFNIPTGTNLPPVSFNSQTPYIPFNLGALSAMSNQQLEDLINQGREKVVEATNSVTA
VRIQPLEDIISAVWKENMNLSEAQVQALALSRQASQELDVKRREAIYNDVLTKQQMLISC
VQRILMNRRLQQQYNQQQQQQMTYQQATLGHLMMPKPPNLIMNPSNYQQIDMRGMYQSVA
GGMQPPPLQRAPPPMRSKNPGPSQGKSM
NT seq 7467 nt   +upstreamnt  +downstreamnt
atgactgctgagcccatgagtgaaagcaagttgaatacattggtgcagaagcttcatgac
ttcctggcacactcatcagaagattctgaagaaacaagttctcctccaagacttgtgatg
aaccaaagcacagaaaaagtcagtggttctggaaataactcagatatgatggaaaacagc
aaggaagagggagctagctcttcagaaaaatctaaatcatcaggatcatcacgatcaaaa
aggaaaccttcagttgtaacaaagtatgtagaatctgatgatgaaaaacctttggatgaa
actgtaaatgaagatgcttctaatgaaaattcagaaaatgatattactatgcaaagcttg
ccaaaaggtacagtgattgtacaaccagagccagtgctgaatgaagacaaagatgatttt
aaagggcctgaatttagaagcagaagtaaaatgaaaactgaaaatctcaaaaaacgcgga
gaagatgggcttcatgggattgtgagctgcacagcttgtggacaacaggtcaatcatttt
caaaaagattccatttatagacatccttcactgcaagtacttatttgtaagaattgcttt
aaatattacatgagtgatgatattagccgtgactctgatggaatggatgaacaatgtagg
tggtgtgcagaaggtggaaacttgatttgttgcgacttttgccataatgccttctgcaag
aaatgcattctgcgcaaccttggtcgaaaggagctctctacaataatggatgaaaacaac
cagtggtattgctacatatgtcacccagaacctttgttggacttggtcactgcatgtaat
agcgtatttgaaaatttagaacagttgttgcaacaaaataagaagaagataaaagttgac
aatgaaaagagtaataaagcatatgaccatgcacccaggttttctccaaagaaaaatagt
tccagttgtaatggagaagaaaagaaattagatgattcatgttctggttcagtaacctac
tcttattcagcactaattgtgcccaaagagatgattaagaaggcaaaaaaactgattgag
accacaactaacatgaactccagttacatcaagtttttgaagcaggcagcagataattcc
gaaaccaattctgctacaaagttacgccagcttaaggcttttaaatctgtgttagctgat
atcaagaaagctcatcttgcattagaagaagatttgaattcagagattcaagctttggat
gctgtaaacaaagagaaaagtaccaaagagcataaggtcatagatgctaagtctgaaaca
aaagtacgaaaaggagaaaaaccctgtgctttagaaagaaaagatatttcaaaatcagaa
gttaaactggcaagaaagcaggtggatagtgagcacatggatcagagtattacagtacag
gaacaaagagcaaataaaagtgccagtggtgaacataaaaaatctgataaaaaagaagaa
cctcagtatgaacctgctaacacttccgaagatttagacatggatattgtttctgttcct
tcctcagttccagaagacatttttgagaatcttgagacagctatggaagttcagagttca
gcagataatcagggagatggcaatagtggaactgaacaagaactggagagttcttctgta
aaattaaatattacttcaaaagacaacagaggaagtattaagtcaaaaactacagctaaa
gtaacaaaagaattatatgttaaactcacccctgtttccctttctaattctccaattaaa
ggtgctgattttcaggaagtaccacaagacaaagatggctataaaagttctggtctgaac
cccaagccagagaactgtggacttggacaggaaaagaatgataatgagcatttgtttgaa
agtgaagttccattactttcagaagaatctgatctccgaagatctccacgtgtaaagact
actcccttgaggcgacagacagaaaccaatcctgcaacatctaattcagatgaagaaagt
aatgaaacagttaaggagaaacaaaaactatcagttccaatgagaaaaaaggataagcgg
aattcttctgacagtgctatagataatcctaaacctaataaatttcctaaatctaagcag
tcagagattgtggatcagaattcagattctgatgaaatgttagcaatcctcaaagaggta
tccaggatgagtcacagttcttcttcagatactgatgttaatgaaactcatacaaatcac
gagaagactttatatgatttaaagagtcaaacaggaaaagatgataaaggaaaacggaaa
cgaaaaagttctacttctggctcagattatgatattaaaaaaggtaaatcagctaaaagg
tctataatttctaaaaagaaacgacaaaaccagtctgaatcttccaattatgactcagaa
ttagaaaaagagataaagagcatgagtaaaattggggctgccagaacaaccagaaaaaga
gttccaaataaagaagattatgattcttctgaagatgaaaaacacagaaaaaaaggaatg
gataatcaagggcagaaaaatgtgaagactgcacaagaaggatcacctgatgatgctgaa
aggaaacaagagagagagaatttctcttcagtagaaggcccagttgataaagacaggacc
aacatggacttaagagatcgaatctctaagaagcagcagtcaggtgtttcttctgatggt
gctgataagctgccttcagggaaagaggagagttctaattctccagaagacaaaaaggtt
gctgaaactaaagaaaagagtaagcatttgaaaaccaaatcgtgtaagaaagtacaggct
ggcttatctgacatggctgataatttcccaaagaaagagcagagtgatgaatcatctgaa
gatgataaaaagcagagcaaaaagggaactgaagtaaaagaaaagaaaactatggacttg
aagaaaaatgtaattaagatagagcaacagtatgaatcatcatctgatagcactgagaaa
ttacccgagggagaagaaatttctcgttttcctaaaggcatgaaacaaaataagaatgac
acgacttacggagaaaagaaaagtaaaaaaataaaagataaaacttctaaaaagaaggat
gaagtatctgataatgctgagaaattgcagggaaaaagagatagttgtgattcttcagaa
gataaaaggagtaagaatggggcatccagtagagtgaagaaaagatgcaacttgcctgaa
aagagttcaaggaagaaacaagattgttcgtcatctgatactgagaaatactccatgaaa
gaagatggttgtgattcttctgataagagactgaaaagaatagaactgagagaaagaaga
aatttaaattcaaagagaaataccaaggaaatacatagtggctcatcatcttctgatggt
gaggaaagttctgaagataataaaaagctgaagaaacagagaacttcagctaaaaagaag
acagtcagtgtaaaggagaaaatgagaaactccctaagaacaagcactaaaaggaagcaa
gctgatattacatcatcatcatcctctgatataggagatgatgatcagaattctgtgggc
gaggggagcagtgatgagcagaaaattaagcctgtgactgaaaatttagtgctgtcttca
catactggattttgccaatcttcaggagatgaagccttatctaaatcagtacctgtcaca
gtggatgatgatgacgacgacaatgatcctgagaatagaattgccaagaagatgctttta
gaagaaattaaagccaatctttcctctgatgaggatgggtcttcagatgatgaaccagaa
gaagggaaaaaaagaactggaaaacacaatgaagaaaatccaggagatgaggaagcaaaa
aatcaagtcaattctgaatcagattcagattctgaagaatctaagaagccaagatacaga
cataggcttttgaggcacaaactcactgtgagtgatggagaatctggagaagaaaaaaag
atgaagcctaaagaacacaaagaagccaaaggcagaaatagaaggaaagtgagcagtgaa
gattctgaagattctgatttccaggaatcaggagttagtgaagaagttagtgaatctgaa
gatgaacaacggcccagaacaaggtctgcaaagaaagcagagttggaagaaaatcagcgg
agttataaacagaaaaagaaaaggcgacgtattaaggttcaagaagactcatctagtgaa
aacaagagtaattctgaagaagataaagaagaagaggaagaggaagaagaagatgaagat
gaaaatgatgactccaagtctcctgggaaagggagaaagaaaattagaaagattcttaaa
gatgataaactaagaactgagacacaaaatgctcttaaggaagaggaagagaggcgaaaa
cgtattgctgagagggaacgtgagcgagaaaaattgagagaggtgatagaaattgaagat
gcttcacccaccaagtgtccaataacaaccaagttggttttagatgaagatgaagaaacc
aaagaacctttagtgcaggttcatagaaatatggttatcaaattgaaaccacatcaagta
gatggtgttcagtttatgtgggattgctgctgtgaatctgtaaaaaaaacaaagaaatct
ccaggttcaggatgcattctagcacactgcatgggccttggtaagactttacaggtggta
agttttcttcatacggttcttttgtgcgacaaattggatttcagtacagctttggtggtt
tgtcctcttaatactgctttgaattggatgaatgaatttgagaagtggcaggagggttta
aaagatgatgaaaagcttgaggtctctgaattagcaactgtgaaacgtcctcaggagaga
agctacatgctgcagaggtggcaagaagatggtggtgttatgatcataggctatgagatg
tacagaaatcttgctcaaggaaggaatgtgaagagtaggaagttgaaggaaatctttaac
aaagctttggttgatccaggccctgactttgttgtttgtgatgaaggtcatattctgaaa
aatgaagcatctgctgtttcaaaagctatgaattctatacggtcaaggaggaggattatt
ttaacaggaacaccacttcaaaataacctaattgagtatcattgcatggttaactttatc
aaggaaaatttgctgggatccattaaggagttcaggaatcggtttataaatccaatccaa
aatggtcagtgtgcagattctaccatggtagatgtcagagtgatgaaaaagcgtgctcac
attctctatgagatgttagctggatgtgttcagaggaaagattatacagcattaacaaag
ttcttgcctccaaaacatgaatatgtactagctgtgagaatgactcctattcagtgcaag
ctctatcagtactacttagatcacttaacaggtgtaggtaatagcagtgaaggtggaaga
ggaaaggcaggtgcaaaacttttccaagattttcagatgttaagtagaatctggactcat
ccttggtgtttgcagctggactacattagcaaagaaaataagggatactttgatgaagac
agtatggatgaatttatagcttcagattccgatgaaacctccatgagtttaagctccgat
gattatacaaaaaagaagaaaacaaaggggaaaaaagggaaaaaagatagtagctcaagt
ggaagtggcagtgacaatgatgttgaagtgattaaagtctggaattcaagatctcgagga
ggtggtgaaggaaatgtggatgaaacaggaagcaatccctcagtttcattaaagctggaa
gaaagtaaagctacttcctcttctaatccaagcagcccagctccagattggtacaaagat
tttgttacagatgctgatgctgaggttttagaacattctggaaaaatggtacttcttttt
gaaattcttcgaatggcagaggaaattggggataaagtccttgttttcagccagtctctc
atatctctggacttgattgaagattttcttgaattggccagtagggaaaagacagaagat
aaagataaacctcttatttataaaggtgaagggaagtggctgcgaaacatcgactattac
cgtttagatggttctactactgcacaatcaaggaaaaaatgggctgaagaatttaatgac
gaaactaatgtgagaggacgattgtttatcatttccaccaaagcaggatctcttggaatt
aatctggtagctgctaatcgagtgattatatttgatgcttcttggaatccatcttatgac
atccagagtatattccgagtttatcgctttggacagactaaacctgtgtatgtatatagg
ttcttagctcagggaaccatggaagataagatttatgatcggcaagtaactaagcagtca
ctctcttttcgagttgttgatcagcagcaggttgagcgtcattttaccatgaatgagctt
actgaactttatacttttgagccagacttactagatgaccctaattcagaaaaaaagaag
aagagggatactcccatgctgccaaaggacaccatacttgcagaacttcttcagatacat
aaagaacacattgtaggatatcatgaacatgattctcttttggaccacaaagaagaagaa
gagttgactgaagaagaaagaaaagcagcttgggctgagtatgaagcagagaagaaggga
ctgaccatgcgtttcaacataccaactgggaccaatttaccccctgtcagtttcaactct
caaactccttatattcctttcaatttgggagccctgtcagcaatgagtaatcaacagctg
gaggacctcattaatcaaggaagagaaaaagttgtagaagcaacaaacagtgtgacagca
gtgaggattcagcctcttgaagatataatttcagctgtatggaaggaaaacatgaatctc
tcagaggcccaagtacaggcgctagcattaagtagacaagccagccaggagcttgatgtt
aaacgaagagaagcaatctacaatgatgtattgacaaaacaacagatgttaatcagctgc
gttcagcgaatacttatgaaccgaaggctccagcagcagtacaatcagcagcaacaacaa
caaatgacttatcaacaagcaacactgggtcacctcatgatgccaaagcctccaaattta
atcatgaatccttctaactaccagcaaattgatatgagaggaatgtatcagtcagtagct
ggtggtatgcagccaccacccttacagcgtgcaccacccccaatgagaagcaaaaatcca
ggaccttcccaagggaaatcaatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (33)   
   KEGG ORTHOLOGY (1)   
   RefGene (28)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (9)   
   UniProt (1)   
   RefSeq(pep) (8)   
DNA sequence (8)   
   RefSeq(nuc) (8)   
Protein domain (3)   
   Pfam (3)   
All databases (58)   

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