KEGG T01329: 100470916

Ailuropoda melanoleuca (giant panda): 100470916

Entry

100470916 CDS T01329

Gene name

BTRC

Definition

beta-transducin repeat containing E3 ubiquitin protein ligase

Orthology

K03362

F-box and WD-40 domain protein 1/11

Organism

aml Ailuropoda melanoleuca (giant panda)

Pathway

aml04114	Oocyte meiosis
aml04120	Ubiquitin mediated proteolysis
aml04310	Wnt signaling pathway
aml04340	Hedgehog signaling pathway
aml04390	Hippo signaling pathway
aml04710	Circadian rhythm

Module

aml_M00380

SCF-BTRC complex

Class

Genetic Information Processing; Folding, sorting and degradation; Ubiquitin mediated proteolysis [PATH:aml04120]
Environmental Information Processing; Signal transduction; Wnt signaling pathway [PATH:aml04310]
Environmental Information Processing; Signal transduction; Hedgehog signaling pathway [PATH:aml04340]
Environmental Information Processing; Signal transduction; Hippo signaling pathway [PATH:aml04390]
Cellular Processes; Cell growth and death; Oocyte meiosis [PATH:aml04114]
Organismal Systems; Environmental adaptation; Circadian rhythm [PATH:aml04710]

SSDB

Motif

Pfam:

WD40 Beta-TrCP_D F-box-like F-box Nucleoporin_N Nup160 DUF4508

Other DBs

NCBI-GI:

301756142

NCBI-GeneID:

100470916

UniProt:

G1MGX1

Position

AA seq 605 aa
MDPAEAVLQEKALKFMCSMPRSLWLGCSSLADSMPSLRCLYNPGTGALTAFQNSSEREDC
NNGEPPRKIIPEKNSLRQTYNSCARLCLNQETVCLASTAMKTENCVAKTKLANGTSSMIV
PKQRKLSASYEKEKELCVKYFEQWSESDQVEFVEHLISQMCHYQHGHINSYLKPMLQRDF
ITALPARGLDHIAENILSYLDARSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSLWR
GLAERRGWGQYLFKNKPPDGNAPPNSFYRALYPKIIQDIETIESNWRCGRHSLQRIHCRS
ETSKGVYCLQYDDQKIVSGLRDNTIKIWDKSTLECKRILTGHTGSVLCLQYDERVIITGS
SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRR
VLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVV
SGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPR
APAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTILIWDFLNDPAAQAEPPRSPSRTY
TYISR

NT seq 1818 nt +upstreamnt +downstreamnt
atggacccagccgaggcggtgctgcaggaaaaagcgctcaagtttatgtgctctatgccc
aggtctctgtggctgggctgctccagcctggcggacagcatgccttcgctgcgatgcctg
tataacccagggactggcgcactcacagctttccagaattcctcagagagagaagactgt
aataatggcgaaccccctaggaagataataccagagaagaattcacttagacagacttat
aacagctgtgccagactctgcttaaaccaagaaacagtatgtctagcaagcactgctatg
aagactgaaaattgtgtggccaaaacaaaacttgccaatggcacttccagtatgattgtg
cccaagcaacgaaaactctcagcaagctatgagaaggaaaaggaactgtgtgtcaaatat
tttgagcagtggtcagagtccgatcaagtggaatttgtggaacatcttatatcccaaatg
tgccattaccaacatgggcacataaactcgtaccttaaacctatgttgcagagggatttc
ataactgctctgccagctcggggtttggatcacattgctgagaacattctgtcatacctg
gatgccagatcactatgtgctgctgaacttgtatgtaaggaatggtaccgagtgacatct
gatggcatgttatggaagaagctcattgagagaatggtcaggacagattctctgtggaga
ggcctggcagaacgaagagggtggggacaatatttattcaaaaacaaacctcctgatggg
aatgctcctcccaactctttttatagagcactttatcctaaaattatacaagacattgag
acaatagaatctaattggagatgtggaagacatagtttacagagaatccactgccgaagt
gaaacaagcaaaggagtttactgtttacagtatgatgatcaaaagatagtaagcggcctt
cgagacaacacaatcaagatctgggataaaagcacgttggaatgcaagcgaattctcaca
ggccacacgggttctgtcctgtgtctccagtatgatgagagggtgatcataactggatca
tcggattccacggtcagggtgtgggatgtaaatacaggtgaaatgctaaacacgttgatt
catcattgtgaagcagttctgcacttgcgtttcaataatggcatgatggtgacgtgctcc
aaagatcgttccattgctgtatgggatatggcctccccaactgacatcaccctccggagg
gtgctagtcggacatcgagctgctgtcaatgttgtagactttgatgacaaatacatcgtt
tctgcatctggagataggactataaaggtatggaacacaagtacttgtgaatttgtaagg
accttaaatggacacaaacgcggcattgcctgtttgcagtacagagacaggctggtcgtg
agtggctcgtctgacaacactatcagattatgggatatagaatgtggtgcgtgtttacga
gtattagaaggccacgaggaactggtgcgctgtattcgatttgataacaagaggatagtc
agtggggcctatgatggaaaaattaaagtgtgggatcttgtagctgccctggacccccgt
gctcctgcagggactctctgtctacggacccttgtggagcattctggaagagttttccga
ctccagtttgatgaattccagattgtcagtagttcacatgatgacacaatcctcatctgg
gacttcctaaacgatccagctgcccaagctgaacccccccgctccccttctcgaacatac
acctatatctccagataa

All links

Pathway (7)   
   KEGG PATHWAY (6)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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