KEGG   Ailuropoda melanoleuca (giant panda): 100471302
Entry
100471302         CDS       T01329                                 
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
  KO
K13131  ATP-dependent RNA helicase DDX20 [EC:3.6.4.13]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aml03041]
    100471302 (DDX20)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     100471302 (DDX20)
Spliceosome [BR:aml03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    100471302 (DDX20)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 100471302
NCBI-ProteinID: XP_002927519
Ensembl: ENSAMEG00000005344
UniProt: D2HXF7
Position
2:78502720..78513301
AA seq 823 aa
MAAAFEAPAALATVEAAMPAERVAAQFAASEPVPGPVRSLRTAHDVSGPRTRTGDVLLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTKYMRDPTFVRLNSSDPSLIGLKQYYKIVNSYPLAHKIFEEKAQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLAVTYCCRGEEEN
VMMKIAQKCNINLLPLPDPIPPGLMEECLDWDVEVQAAVHTYGLASVPTQPLKKQIQKME
RTLQTQKAHGNHVASPRNTSVSSLLVKSKNTTKQKVPVKSHSECGITGKAVSPKAVGCGI
RLEEQMTNSVEISVENSASQQQVKEVLPVSMPKIPCLSSFKIHLPYSLTFTELVEDYEHY
IKEGLEKPVEIIRHYTGPGDQTVNPQNGFVRNRIPEERVLMLASSSQSGDSESDSDSYSS
RTSSQSKGNKSYLEGSSDTQRKDLEPTPVGGHVSLEQPLNGSNAPNPAEYQESPGIQTKA
RHKEGANPRAKQSRRNPPRRSSYRAQAEAQEDGWYDCHRETHPGFSDAYQDYEEYWRAYY
RAWQEYCAAASQSYYWNAQRHPSWMAAYHMNTIYLQEMMRGNQ
NT seq 2472 nt   +upstreamnt  +downstreamnt
atggcggcggcgtttgaagccccggcggctttagcgacggtggaggccgctatgcccgcg
gagcgtgtggccgcacagttcgcggcctcggagccagtccccgggccggtgcggagcctg
cggactgctcacgacgtcagcggtccgcggacccgcacgggggacgtgctgctggcggag
ccggccgacttcgagtcactgctgctgtcgcggccggtgctggaggggctgcgggctgcc
ggcttcgaacggccctcgccggtgcagcttaaggccatcccgctggggcgctgcgggctc
gatttaattgttcaagccaaatctggcactgggaaaacctgtgtgttctctaccattgct
ttggactcgcttgttcttgaaaacctaagtacccagattttgatcttggctcctacaaga
gaaattgctgtacagatacattctgtgattacagctattggaataaaaatggaaggctta
gagtgtcatgtctttattggagggactccattatcacaagacaaaaccagacttaagaag
tgtcatattgctgttggctctcctggcagaattaaacaactgatagaacttgactacttg
aacccaggcagtatacgtctgtttattcttgatgaagcagataagcttttagaagaaggc
agcttccaggagcaaataaactggatttattcttccttgcctgccagtaaacagatgttg
gcagtatcagctacctaccctgaatttttggctaatgctttgacaaagtacatgagggat
cccacttttgtaagactaaattccagtgatccgagtctcataggtttgaagcaatattac
aaaattgtcaattcataccctttggcccataagatttttgaggaaaaggctcagcattta
caggaactgttcagcagaattccgtttaaccaagccttagtcttttctaatttgcatagc
agagcacaacatttggcagatatcctttcttctaaaggctttcctgctgagtgcatttca
ggcaacatgaatcagaatcagcgtcttgatgctatggccaaactgaagcagtttcattgc
agagtcctcatttccacagatttgacttcccgagggattgatgctgagaaggtgaacctg
gttgtaaatctggatgtaccattggattgggagacatacatgcatcggattggcagagct
ggccgttttggtactttggggttggccgtgacctactgttgtcggggagaagaagaaaat
gtgatgatgaaaattgctcagaaatgtaacatcaaccttctgcctttaccagatcccatt
cctcctggtctaatggaagaatgtttggattgggacgtggaggttcaagctgctgtgcat
acgtatggcttagcaagtgtacccacccagcccttaaaaaagcagatccaaaaaatggag
agaacccttcaaactcagaaggctcatggtaaccacgtggcttcacctagaaatacttct
gtatcttcacttttagtcaaatcaaaaaatactactaaacagaaagttcctgtgaaaagc
cactcagagtgtggaatcacaggaaaagcagtgtccccaaaagcagtgggctgtggcata
cgattggaagagcaaatgacgaattctgttgagatctctgttgaaaactctgccagtcag
cagcaggtcaaagaggttttacccgtgtcaatgcccaaaattccttgtctgtcttccttt
aaaatccatctgccatactctttgacttttacagaattggtagaggattatgaacactat
attaaagaggggttagagaaacctgtggaaatcatcaggcattacacaggtcctggggat
cagactgtgaatcctcaaaacggttttgtaagaaatagaattcccgaggagagagtgctg
atgttggcaagtagtagtcagtctggagactcggagagtgacagtgattcttacagctca
aggacttcttcccagagcaaaggaaataagtcctacttggaaggctcttcagatactcag
cggaaagacctggaacccactcctgtgggtggccacgtctctctggaacaacctctgaat
ggaagcaacgcccctaatccagcagagtatcaagaatcgcctggaatccagacaaaagcc
aggcataaagagggggctaacccaagagctaagcagagccggagaaaccctcccaggcgg
tcttcctatcgggcgcaggcagaagctcaggaagatgggtggtatgactgccacagggaa
acacatccgggtttttccgatgcctaccaggattatgaggagtactggagggcttactac
cgggcatggcaggagtactgcgctgctgcttctcagtcgtattactggaacgctcagagg
cacccaagctggatggcggcttatcacatgaataccatttatctccaagaaatgatgcga
ggcaaccagtga

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