KEGG   Ailuropoda melanoleuca (giant panda): 100471686
Entry
100471686         CDS       T01329                                 
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
  KO
K12820  pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:3.6.4.13]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100471686 (DHX15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aml03041]
    100471686 (DHX15)
   03009 Ribosome biogenesis [BR:aml03009]
    100471686 (DHX15)
Spliceosome [BR:aml03041]
 Complex A
  U2 snRNP components
   U2 related factors
    100471686 (DHX15)
 Complex B
    100471686 (DHX15)
 Complex C
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-SnRNP related factors
    100471686 (DHX15)
Ribosome biogenesis [BR:aml03009]
 Eukaryotic type
  90S particles
   Helicases
    100471686 (DHX15)
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C HA2_N DEAD AAA_22 AAA_19 SRP54 nSTAND3 Atrophin-1 AAA_29 Flavi_DEAD AAA_25
Other DBs
NCBI-GeneID: 100471686
NCBI-ProteinID: XP_034526852
Ensembl: ENSAMEG00000010482
Position
11:91516135..91568142
AA seq 776 aa
IFIFRKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKELRASTNAMLISAGLPPLKA
SHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTNLPHTPRYYDILKKRLQLPV
WEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGPKRGVACTQPRRVAAM
SVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIIL
DEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPV
EIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPE
VGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDP
GFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTY
PEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELG
SMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAH
IDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTD
FTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEF
VLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAKLQSKEYSQY
NT seq 2331 nt   +upstreamnt  +downstreamnt
atttttatttttaggaaggatcgagatcgtgaccgggatcgtgaagatcggtctaaagat
cgagaccgagaacgtgatagaggagatagagagcgggagagggagaaagaaaaggagaag
gaattgcgagcttcaactaatgctatgcttatcagtgctggattaccacctttaaaagct
tcccattcagctcactcaacccactctgcacattcaacacattcgacacattctgctcat
tcaacacacaccggacatgcaggacacacatcacttccacagtgtattaatccatttacc
aacctaccccatactcctcgatactatgatattctaaagaaacgacttcagctccctgtt
tgggaatacaaggataggtttacagatattctggttagacatcagtcctttgtactggtt
ggtgagactgggtctggtaaaacaacacagattcctcagtggtgtgtggagtacatgcga
tcattaccaggacccaagagaggagttgcctgtacccagcccaggagagtggctgcaatg
agtgtggctcagagggttgctgatgaaatggatgtaatgttgggccaggaagttggttac
tccatccgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatggg
atgttacttcgtgaagcaatgaatgatcccctcctagagcgttatggtgtaataattctt
gatgaggctcatgaaaggactttggctacagatatcctcatgggtgttctgaaggaagtt
gtaagacagagatcagacttaaaggttatagttatgagtgctactctagatgcagggaaa
ttccagatttactttgataactgtcctctcttaactattcctgggcgtacacatcctgtt
gagatcttttatactcctgaaccagagagagattatcttgaagcagccattcgaacagta
attcaaattcatatgtgcgaagaggaggagggagatcttctacttttcttaactggtcaa
gaggaaattgatgaagcctgtaagagaataaagcgtgaggttgatgatttgggccctgaa
gttggtgacattaaaatcattccattatactctacacttcctcctcagcagcaacaacgc
atttttgagcctccgcctccaaaaaagcagaatggagcgattggaagaaaggtagttgtg
tcaactaacattgcagagacatctttgacaatagatggtgtggtatttgtgattgatcct
ggatttgcaaaacaaaaggtgtacaatcctcgaatcagagttgagtctcttttggtgaca
gccattagtaaagcttcagctcaacagagggctggtcgagctgggcgtaccagacctggg
aaatgcttcagactttatacagagaaagcttataaaacagaaatgcaggataacacctat
cctgagattttgcgttctaatttaggatcagttgtgttacaattgaagaaacttggtatt
gatgatttggtgcattttgactttatggatccaccagctcctgaaactctgatgcgagcc
ttagaacttttgaattacctggctgctttaaatgatgatggagatctgactgaattggga
tccatgatggcagagtttcctctagatccacagctcgctaaaatggttattgcaagttgt
gactacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgt
tttgttcgccccacggaggccaagaaagccgcagatgaagccaagatgagatttgcccac
atagatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaa
tcggttcagtggtgttatgacaacttcattaactacaggtccctgatgtcagctgataat
gtacgccagcagctatcacgaattatggacagatttaatttgcctcgtcgaagtactgac
tttacaagcagggactattatattaatataagaaaagctttggttactgggtattttatg
caggtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggtt
cagttgcatccctctactgttcttgaccacaagcctgaatgggtgctttataatgagttt
gttcttacaacgaagaattacatccggacgtgtacagatatcaagccagaatggttggtg
aaaattgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacag
ttggaccgcatcattgccaaacttcaatccaaggaatattcacagtactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (53)   
   KEGG ORTHOLOGY (1)   
   RefGene (48)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (13)   
   Pfam (13)   
All databases (74)   

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