KEGG   Ailuropoda melanoleuca (giant panda): 100471907
Entry
100471907         CDS       T01329                                 
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1 isoform X1
  KO
K10683  BRCA1-associated RING domain protein 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    100471907 (BARD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100471907 (BARD1)
   04121 Ubiquitin system [BR:aml04121]
    100471907 (BARD1)
   03036 Chromosome and associated proteins [BR:aml03036]
    100471907 (BARD1)
   03400 DNA repair and recombination proteins [BR:aml03400]
    100471907 (BARD1)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     100471907 (BARD1)
Ubiquitin system [BR:aml04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   BRCC complex
    100471907 (BARD1)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     100471907 (BARD1)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     100471907 (BARD1)
SSDB
Motif
Pfam: zf-RING_6 Ank Ank_4 Ank_2 Ank_5 Ank_3 BRCT BRCT_2 zf-RING_5 zf-C3HC4 zf-C3HC4_2 Siva
Other DBs
NCBI-GeneID: 100471907
NCBI-ProteinID: XP_034511014
Ensembl: ENSAMEG00000003804
Position
2:complement(177378120..177462958)
AA seq 774 aa
MPGNRQPRVRSGNEPRPASTMEPEGRGAWAHSRAALDRLEKLLRCSRCTHILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHGDKLSDLKE
DASRENLFNDAESKKNSIKMWFSPRSKKVRYVVSKLSVQTQPQEINDENARQASMYEFVS
TSPPTSVSERAKKASARSGKKQKKKTLTEINQEWNLEADKEDGELDSKEEFKEKLVSFCS
QPSVIGGPQTNGEIDLLASGSVTESQCFSSFAEFSLPLAEQTESPETEGRNEDVTPQKNV
CGNPLPPEQSLPSGPNGRRGRRSRRSSPVAKRCRSSLPGTSRQHIVLSENKPLPGRSSPP
SGKLKVGDTLRRKSSNVSDESLSLSPGTPPSALNSPSYRRMMSSPAATKLSPSSLMAVKR
NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHVKVVELLLQHK
ALVNTTGYQNDSPLHDAAKNGHLDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLL
LPEKNESSSTRHCSVQTSTGPRRDGPLVLIGSGLSSEQQKMLSELAAILKAKKCAEFDNT
VTHVIVPGDTAQSTLKCMLGILSGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLN
KEQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVAAAGGQVLSRKPKPDSDVTQTINTVAYH
ARPDSDQRFCTQYIIYEDLSNRRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq 2325 nt   +upstreamnt  +downstreamnt
atgccggggaaccggcagccgagggtccgctccgggaacgagcctcgtcccgcgtccacc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgcttgaccggctggag
aagctgctgcgctgctcacgttgtactcatattctgagggagcctgtgtgtttagggggg
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttatactccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagcttcggaatttgctacatggcgataagctttcagatttgaaagaa
gatgcatctagggaaaatttatttaatgatgcagaaagtaagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgagtaaactttcagtgcaaact
cagcctcaagagataaatgatgagaatgctcggcaggcttccatgtacgaatttgtttct
acaagtcctccaacaagtgtttctgagagggctaaaaaggcttctgcaagatctggaaaa
aaacaaaaaaagaaaactttaactgaaatcaaccaagaatggaacttagaggcagataaa
gaagatggtgaacttgactccaaagaggaatttaaggaaaagctggtgtctttctgtagc
caaccgtctgttattggtggtcctcagacaaatggtgaaatagacttactagcaagtggt
tctgtcacggaatcacagtgttttagcagcttcgctgaattctctttaccattagctgag
caaacagagtctccagaaacggagggcaggaatgaagacgtgactccccagaagaatgtc
tgtgggaatcctcttccacctgagcagtccttgccatcaggtcccaatgggcgacgtggg
cgtcgcagcagacggtccagtcccgttgctaagaggtgcagaagcagccttcctggcacc
agtaggcagcacatagtgctttcagaaaacaaaccgttgcctggccgctcctcaccaccc
tcaggcaaactcaaagttggtgacacattaaggagaaaaagcagtaatgtatcagacgag
tccctgagcctctcaccaggtacaccgccttctgcgctgaacagcccgagttacagacgg
atgatgtctagccccgcagccacgaagctgtcacccagtagccttatggctgtgaaaaga
aatcatagaggagagactctgcttcatattgcttcaattaagggcgacataccttctgtt
gagtacctcttacaaaatggaagtgacccaaatgttaaagaccatgctggatggacacca
ttgcatgaagcctgcaatcacgggcatgtgaaggtggtggagttgttgctgcagcacaag
gcgttggtgaacaccactggctatcagaacgactcgccgcttcatgatgccgccaagaat
gggcacttggatatagtcaagctcttactttcctacggagcctccaggaacgccgttaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaaatcactgttgctg
ctaccagagaagaatgaatcatcatcaactcgccattgctcagtacagacgagcactggt
ccgcgtagggatggacctcttgtgcttataggcagtgggctttcttcagaacaacaaaaa
atgctcagtgagctggcagcaattcttaaggctaaaaaatgtgccgaatttgacaataca
gtaactcatgtcattgttcctggggatacagctcaaagtaccctaaaatgtatgcttggg
attctcagtggatgttggatcttaaaatttgaatgggtgaaagcatgtctacagagaaaa
gcatgtgaacaggaggaaaaatacgagattcctgaaggaccacagcgaagcaggctcaac
aaggaacagctgttgccaaagctgtttgatgggtgctacttctattttgggggaaccttc
aaacaccatccaaaggacaaccttattaagcttgtcgctgcagctgggggccaggtcctc
agtagaaagcccaagccagacagtgacgtgactcagaccatcaatacggtcgcgtaccac
gcaagacccgattccgatcagcgcttctgcacacagtatatcatctacgaagatttgtct
aatcgtcgcccagagagggttcggcagggcaaagtctggatggctccttccagctggttt
atcgattgtgtgatgtcctttgagttgctccctcttgacagctga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (12)   
   Pfam (12)   
All databases (51)   

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