KEGG   Ailuropoda melanoleuca (giant panda): 100473360Help
Entry
100473360         CDS       T01329                                 

Gene name
USP1
Definition
(RefSeq) ubiquitin specific peptidase 1
  KO
K11832  ubiquitin carboxyl-terminal hydrolase 1 [EC:3.4.19.12]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:aml00001]
 Genetic Information Processing
  Replication and repair
   03460 Fanconi anemia pathway
    100473360 (USP1)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     100473360 (USP1)
Peptidases [BR:aml01002]
 Cysteine Peptidases
  Family C19: ubiquitin-specific protease family
   100473360 (USP1)
Ubiquitin system [BR:aml04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    100473360 (USP1)
DNA repair and recombination proteins [BR:aml03400]
 Eukaryotic Type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     100473360 (USP1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: UCH UCH_1
Motif
Other DBs
NCBI-GeneID: 100473360
NCBI-ProteinID: XP_002917738
Ensembl: ENSAMEG00000014832
UniProt: D2H7G9
Position
Un
AA seq 786 aa AA seqDB search
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQENEEKAAEYRGSEIDQV
VPAAQSSPINCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKSGVKNLFNIISRKK
EALKEETNQKDKGNCKEDCLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRR
LLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEEVKNVVELSTKVEEKPHQK
EEMNGINSIEMDNLRHSEDYKEKLQKGNGKRKSDIEFGNMKKKVKLSKEHQSLEENQRQT
RSKRKATGGDTLEIPSKIIPKYVSENESARPSQKKSRVKINWLKPATKQPSILSKFCSLG
KITTNQGSKGQSKENEYDLEEDLGKCENHNTTNGCELESPGNNVKPVNVNEVKPINKGAE
QIGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPK
TEMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASG
LEFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVK
VTDLHSLELDKGNFVIDQMCEIGKPEPLNEEEARGVVENYDDEEVSIRVSGNTQPSKVLN
KKNAEAIGLLGGQKSKADYELYNKASNPDKVASTAFVENRNSETNNTNGTHEFDTNKESS
DQAGINFSGFENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYL
LFYKKL
NT seq 2361 nt NT seq  +upstreamnt  +downstreamnt
atgcctggtgtcatacctagtgaaagtaatgggctttcaagaggtagcccatcaaagaaa
aacagactttccttgaagttttttcagaaaaaggaaactaagagagccttggatttcaca
gattctcaagaaaacgaagaaaaggctgctgaatatagaggatctgaaattgatcaagtt
gttcctgcagcacagtcctcacctataaactgtgagaagagagaaaatttgttaccattt
gtgggactgaataatctcggcaatacttgttatcttaatagtatacttcaggtattatat
ttttgtcctggttttaaatctggagtgaagaacttatttaatattatttcaaggaagaaa
gaagccctaaaagaggaaaccaatcaaaaagataagggaaattgcaaagaagattgtttg
gcaagttatgaactaatatgcagtttacagtccttgatcatttcagttgaacagcttcag
gctagctttctcttaaatccagagaaatacactgatgaacttgctactcagccaaggcga
ctgcttaacacactcagggaactcaaccctatgtatgaaggatatctacagcatgatgca
caggaagtattacagtgtattttgggaaacattcaagaaacatgccaactcctaaaaaaa
gaagaagtaaaaaatgtggtagaattatccactaaggtagaagaaaaacctcatcagaaa
gaggaaatgaatggtattaacagcatagagatggacaatctgaggcattctgaagattat
aaagaaaaactccaaaaaggaaatgggaaaagaaaaagtgacattgaatttggtaacatg
aagaaaaaagttaaattatccaaggaacaccagtcattggaagagaaccagagacaaacc
agatcaaaaagaaaagctacaggtggtgatacgttagagattccttctaaaataatcccc
aagtatgtttctgaaaatgaaagtgcaagaccctcacaaaagaaatcaagagttaaaata
aattggttaaagcctgcaactaagcaacccagcattctttctaaattctgtagtctgggg
aaaataacaacaaaccagggatccaaaggacagtcgaaagaaaatgaatatgatcttgaa
gaggacttggggaagtgtgaaaatcataacacaactaatggttgtgaacttgagtctcca
gggaataatgttaagcccgttaatgttaatgaagttaagcccataaacaaaggtgcagag
caaattggttttgagctagtagagaaattatttcaaggtcagctggtattaaggactcgt
tgcttagaatgtgaaagtctaacagaaagaagagaagattttcaggacatcagtgtacca
gtacaagaagatgagctttccaaagtagaggagagttctgaaatttctccagagccaaaa
acagaaatgaagaccctgagatgggcaatttcacagtttgcttcagtggagaggattgta
ggagaagataaatatttctgtgaaaattgccatcattatactgaagctgaacgaagtctt
ttgtttgacaaaatgcctgaagttataactattcatttgaagtgctttgctgctagtggc
ttggagtttgattgttatggtggtggactttccaagatcaacactcctttactgacacct
cttaaattgtcactagaagaatggagcacaaagccaaccaacgacagctatggattattt
gcggttgtgatgcacagtggcattaccatcagtagtgggcattacactgcttctgttaaa
gtcaccgaccttcacagtttagaactagataagggaaattttgtgatcgaccaaatgtgt
gaaataggtaagccagaaccattgaatgaggaggaagcaaggggtgtggttgaaaattat
gatgatgaagaagtgtcaattagagtaagtggaaatacacagccaagtaaagttttgaac
aaaaaaaatgcagaagctattggacttcttggaggacaaaagagcaaagcggattatgag
ctatacaacaaagcatctaatcccgataaagttgccagtacagcatttgttgaaaataga
aattctgagactaacaatactaatgggacccatgaatttgatacaaacaaggaatccagt
gaccaagcaggcattaactttagtggatttgagaacaaaatttcatatgtagtacaaagc
ctaaaggagtatgaggggaagtggttactttttgatgattctgaagtgaaagttacagaa
gagaaggactttttgaattctctttccccttctacatctcctacatctactccttatttg
ctgttttataagaagttatag

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (15)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (6)   
   RefSeq(nuc) (6)   
Protein domain (2)   
   Pfam (2)   
All databases (43)   

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