KEGG   Ailuropoda melanoleuca (giant panda): 100473642
Entry
100473642         CDS       T01329                                 
Symbol
EXOSC4
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100473642 (EXOSC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aml03019]
    100473642 (EXOSC4)
Messenger RNA biogenesis [BR:aml03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100473642 (EXOSC4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     100473642 (EXOSC4)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100473642
NCBI-ProteinID: XP_002922117
Ensembl: ENSAMEG00000006093
UniProt: G1LHM3
Position
9:102959837..102962138
AA seq 245 aa
MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG
SRARALPDRALVNCQYSSATFSTGERKRRPHGDRKSCEMGLQLRQTFEAAILTQLHPRSQ
IDIYVQVLQADGGTYAACVNAATLAVLDAGIPMRDFVCACSAGFVDSTALADLSHVEEAA
GGPQLALALLPASGQIALLEMDARLHEDHLEQVLEAAAQAARDVHTLLDHVVRQHVCEAS
VLLGD
NT seq 738 nt   +upstreamnt  +downstreamnt
atggcgggcctggagctcctgtcggaccagggctaccgggtagacggacggcgcgccggg
gagctgcgcaagatccaggcgcggatgggcgtgttcgcgcaggccgacggctcggcctac
atcgagcaaggcaacaccaaggcgcttgcggtggtgtacgggccgcacgagatccgcggc
tcccgagcacgagccctgccagacagggccctggtgaactgtcagtatagttctgcaacc
ttcagcacaggtgaacgcaagaggcgaccacacggggaccgtaagtcttgcgagatgggc
ctgcagctgcgtcagacctttgaggcagccatccttacacagctccacccgcgctcccag
attgatatatatgtgcaggtgctgcaggcggatggtgggacctatgcagcttgtgtgaat
gcagccacgctggcggtgctggatgctggaatacccatgcgggactttgtgtgtgcctgc
tcagctggctttgtggacagcacagccctggcggacctcagccatgtggaagaggcagct
ggcggtccccaactggccctggccttgctgccggcctcaggccagattgcactgctcgaa
atggatgccaggctacacgaggaccacctggagcaggtgctggaggctgctgcccaggct
gcccgggacgtgcacacactgttggaccacgtggttcggcagcatgtatgtgaggcctct
gttttgctaggggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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