KEGG   Ailuropoda melanoleuca (giant panda): 100476326Help
Entry
100476326         CDS       T01329                                 

Gene name
LAMC1
Definition
(RefSeq) laminin subunit gamma 1
  KO
K05635  
laminin, gamma 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Prion diseases
Toxoplasmosis
Amoebiasis
Pathways in cancer
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    100476326 (LAMC1)
  Signaling molecules and interaction
   04512 ECM-receptor interaction
    100476326 (LAMC1)
 Cellular Processes
  Cellular community - eukaryotes
   04510 Focal adhesion
    100476326 (LAMC1)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    100476326 (LAMC1)
   05222 Small cell lung cancer
    100476326 (LAMC1)
  Neurodegenerative diseases
   05020 Prion diseases
    100476326 (LAMC1)
  Infectious diseases
   05146 Amoebiasis
    100476326 (LAMC1)
   05145 Toxoplasmosis
    100476326 (LAMC1)
Cell adhesion molecules and their ligands [BR:aml04516]
 1. Immunoglobulin Superfamily
  Neural system
   Enzymatic CD
    PTPRF, LAR; receptor-type tyrosine-protein phosphatase F [KO:K05695]
     Laminin-1 Extracellular matrix (ECM) components
      100476326 (LAMC1)
  Others
   LU; Lutheran blood group glycoprotein [KO:K06578]
    Laminin-10 Extracellular matrix (ECM) components
     100476326 (LAMC1)
    Laminin-11 Extracellular matrix (ECM) components
     100476326 (LAMC1)
   MCAM, CD146; melanoma cell adhesion molecule [KO:K06534]
    Laminin-8 Extracellular matrix (ECM) components
     100476326 (LAMC1)
   CXADR, CAR; coxsackievirus and adenovirus receptor [KO:K06788]
    Laminin-1 Extracellular matrix (ECM) components
     100476326 (LAMC1)
 2. Integrin Family
  Beta1 integrins
   VLA-1
    ITGB1; integrin beta 1 [KO:K05719]
      100476326 (LAMC1)
     Laminin-2 Extracellular matrix (ECM) components
      100476326 (LAMC1)
   VLA-2
     Laminin-1 Extracellular matrix (ECM) components
      100476326 (LAMC1)
   VLA-3
      100476326 (LAMC1)
     Laminin-10 Extracellular matrix (ECM) components
      100476326 (LAMC1)
     Laminin-11 Extracellular matrix (ECM) components
      100476326 (LAMC1)
   VLA-6
     Laminin-1 Extracellular matrix (ECM) components
      100476326 (LAMC1)
     Laminin-8 Extracellular matrix (ECM) components
      100476326 (LAMC1)
   VLA-7
     Laminin-1 Extracellular matrix (ECM) components
      100476326 (LAMC1)
  Beta4 integrins
   alpha 6 beta 4
    ITGB4; integrin beta 4 [KO:K06525]
     Laminin-1 Extracellular matrix (ECM) components
      100476326 (LAMC1)
 7. Others
  DAG1; dystroglycan 1 [KO:K06265]
   Laminin-1 Extracellular matrix (ECM) components
    100476326 (LAMC1)
   Laminin-2 Extracellular matrix (ECM) components
    100476326 (LAMC1)
  APP; amyloid beta A4 protein [KO:K04520]
   Laminin-1 Extracellular matrix (ECM) components
    100476326 (LAMC1)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
Ensembl: 
UniProt: 
Position
Un
AA seq 1580 aa AA seqDB search
AGCARAAMDECTDEGGRSQRCMPEFVNAAFNVTVVATNTCGAPPEEYCVQTGVTGVTKSC
HLCDAGQPHLQHGAAFLTDYNNQADTTWWQSQTMLAGVQYPNSINLTLHLGKAFDITYVR
LKFHTSRPESFAIYKRTREDGPWIPYQYYSGSCENTYSKANRGFIRTGGDEQQALCTDEF
SDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIRVTLNRLNTFGDEVFNDPKV
LKSYYYAISDFAVGGRCKCNGHASECVKNEFDKLVCNCKHNTYGVDCEKCLPFFNDRPWR
RATAESASECLPCECNGQSQECYFDPELYRSTGHGGHCTNCQGNTDGANCERCRENFFRL
GNNEACSPCHCSPVGSLSTQCDSYGRCSCKPGVMGDKCDRCQPGYHSLTEAGCRPCSCNP
SGSIDECNVETGRCVCKDNVEGFNCERCKPGFFNLESSNPRGCTPCFCFGHSSVCTNAVG
YSVYPITSTFQIDEDGWHVEQRDGSEASLEWSSARQDITVISDSYFPRYFVAPAKFLGKQ
VFSYGQNLSFSFRVDRRDTRLSAEDLVLEGAGLRVSVPLIAQGNSYPSETTVKYVFRLHE
ATDYPWRPPLTPFEFQKLLNNLTSIKIRGTYSERSAGYLDDVTLTSARPGPGVPATWVES
CTCPVGYGGQFCEMCLSGYRRETPSLGPYSPCVLCTCNGHSETCDPETGVCDCRDNTAGP
HCERCGDGYYGDSTSGSSSDCQPCPCPGGSSCAVVPKTQEVVCTSCPTGTTGKRCELCDD
GYFGDPLGENGPVRLCRLCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDRCKDGFF
GNPLAPNPADKCKACACSPYGTAKQQSGCNPVTGQCECLPHVTGRDCGACDPGFYNLQSG
QGCERCDCHALGSTSGQCDIRTGQCECQPGVTGQHCERCEVNHFGFGPEGCKPCDCHSEG
SLSLQCKDDGRCECKQGFVGNRCDQCEENYFYNRSWPGCQECPACYRLVKDKVADHRVKL
QELENLIANLGTGEEVVTDQAFEDRLKEAEREVMDLLREAQDVKDVDQNLIDRLQRVNNT
LSSQISRLQNIRNTIEETGNLAEQARARVESTEQLIEIATRELEKAKIAVANVSITQPES
TGDPNNMTLLAEEARKLAERHKQEADDIVRVAKTANETSTEAFNLLLRTLAGENQTALEI
EELNRKYEQAKNMSQDLEKQAARVHEEAKRAGDKAVEIYASVAQLTPVDSEALENEANKI
KKEAEDLDRLIDQKLKDYEDLREDMRGKELEVKKLLEKGKTEQQTADQLLARADAAKALA
EEAAKKGRNTLQEANDILNNLKDFDRRVNDNKTAAEDALRRIPAINQTIIEANEKTREAQ
LALGSAAADATEAKSKAHEAERIASAVQKNATSTKAEAERTFAEVTDLDNEVNSMLKQLQ
EAEQELKRKQEDADQDMMMAGMASQAAQEAEINARKAKNSVTSLLHLINDLLEQLGQLDT
VDLNKLNEIEGTLNKAKDEMKVSDLDRKVSDLENEARKQEAAIVDYNRDIEEITKDIRNL
EDIKKTLPSGCFNTPSIEKP
NT seq 4743 nt NT seq  +upstreamnt  +downstreamnt
gccggctgcgcccgggcagccatggacgagtgcacggacgagggcgggcggtcgcagcgc
tgcatgcccgagttcgtcaacgccgccttcaacgtgaccgtggtggccaccaacacgtgc
ggggctccgcccgaggagtactgtgtgcagaccggggtgaccggggtcaccaagtcctgt
cacctgtgcgacgccgggcagccccacctgcagcacggggcagccttcttgaccgactac
aacaaccaggccgacaccacctggtggcaaagccagaccatgctggccggggtgcagtac
cccaactccatcaacctcacgctgcacctgggaaaagcttttgacatcacatacgtgcgc
ctgaagttccacaccagccgccccgagagcttcgccatttacaagcgcacgcgggaagat
gggccctggattccttaccagtactacagcggctcctgcgagaacacctactcgaaggca
aaccgcggcttcatcaggacaggaggagacgagcagcaggccttgtgcacagatgaattc
agtgacatttcccctctaactgggggcaacgtggccttttcaacactagaaggaaggccc
agcgcctacaactttgacaacagccctgtgctgcaggaatgggtaactgccaccgacatc
cgagtaactctcaatcgcctgaacacctttggagatgaagtgtttaacgaccccaaagtt
ctcaagtcctattattatgcaatctctgattttgctgtgggtggtaggtgtaaatgcaac
gggcatgcaagtgagtgtgtgaagaatgaatttgacaagctggtgtgtaattgcaaacat
aatacttacggggtagactgtgaaaagtgtctgcctttcttcaacgaccggccgtggagg
agggcaactgccgagagcgccagcgaatgcctgccctgtgagtgtaatggccaatcacag
gagtgctactttgaccccgaactgtaccggtccaccggccacggcggccactgtaccaac
tgccagggtaacacagatggcgccaactgcgagagatgccgggagaatttcttccgcctt
gggaacaacgaagcctgctctccctgtcactgtagtcctgtgggttctctcagcacacag
tgtgatagctatggtaggtgtagctgcaagccgggcgtgatgggggataagtgtgaccgt
tgccagcccggataccattctctcacggaggcagggtgcaggccatgctcttgtaatccc
tctggcagcatagatgaatgtaatgttgaaacaggaagatgtgtttgcaaagacaacgtt
gaaggctttaattgtgagagatgcaaacctggattttttaatctggaatcatctaatcct
aggggttgcacaccctgcttctgctttgggcattcttctgtctgtacaaatgctgttggc
tacagtgtttatcctataacctctacctttcagatcgatgaagacgggtggcatgtggaa
caaagggacggctctgaagcgtcactcgagtggtcctctgcgaggcaggatatcaccgtc
atctcagatagctactttcctaggtacttcgttgcccctgcgaagttcttgggcaagcag
gtgttcagttatggtcagaacctctccttctcctttcgcgtggacaggcgagacactcgc
ctctccgcagaagacctggtgcttgagggagctggcctgagagtgtctgtgcccttgatc
gctcagggcaattcctatccgagtgagaccactgtgaagtatgtcttcaggctccatgaa
gccacagattacccttggaggcctcctcttacccctttcgaatttcagaagctcctaaac
aatttgacctctatcaaaatccgtgggacgtatagtgagagaagtgccggatatctggat
gatgtcaccctaacgagtgctcgcccggggcccggggtgcctgccacttgggtggagtcc
tgcacctgtcctgtgggatacggagggcagttttgtgagatgtgcctctcgggttacaga
agagaaactccgagtcttggaccgtacagcccgtgtgtgctttgtacctgcaatggacac
agtgagacctgtgaccccgagacaggtgtgtgtgactgcagagacaacacagccggcccc
cactgtgagaggtgcggcgatgggtactatggcgattccacctcgggcagctcgtccgac
tgccagccctgcccgtgccctgggggctcgagctgcgccgtcgtcccgaagacgcaggag
gtggtgtgcaccagctgtcctaccggcaccaccggtaaaaggtgtgagctctgtgatgat
ggctactttggagaccctctgggtgaaaacggccctgtgagactttgccgcctttgtcaa
tgcaatgacaacatcgaccccaatgcggttggaaattgcaatcgcttgacaggagaatgc
ctgaaatgcatctataacactgctggcttctactgtgaccgatgcaaagatggatttttt
ggaaatcccctggctcccaatccagcagacaaatgcaaagcctgtgcgtgcagtccctac
ggaaccgcgaagcagcagagcggctgtaaccctgtgaccgggcagtgcgaatgtctgccc
cacgtgaccggccgggactgtggagcctgtgaccctggattctacaacctgcagagtggg
cagggctgtgagaggtgtgactgccatgcgttgggttctaccagtggacagtgtgacatc
cgcactggccagtgtgagtgccagcctggcgtcacgggccagcactgtgagcgctgtgag
gtcaaccactttgggtttggacccgaaggctgcaaaccctgtgactgtcattctgaggga
tctctctcactccagtgcaaagatgatggtcgatgtgaatgtaaacagggttttgtggga
aatcgctgtgaccagtgtgaagagaactatttctacaatcggtcttggcctggctgccag
gagtgtccagcatgttaccggctggtaaaggataaggttgctgatcatcgagtgaaactc
caggaattagagaacctcatagcaaaccttggaactggggaagaggtggtgacagatcaa
gcctttgaggacagactaaaggaagcagagagagaagttatggacctccttcgagaggcc
caggatgtcaaagatgtagaccagaatttgatagaccgcctccagagagtgaataacacc
ttatccagccaaattagccgtttacagaatatccgcaataccattgaggagactggaaac
ttggctgagcaagcacgtgccagggtggaaagcacagagcagttgattgaaatcgcgacc
cgagaacttgagaaagcaaagattgctgttgccaacgtgtcaatcactcagccagagtct
acaggggacccaaacaacatgactcttctggcagaagaggcacgaaagcttgctgaacga
cataaacaagaagctgatgatattgtaagagtggcaaagacagctaatgagacatcaact
gaagcatttaatctgcttctgagaacactggcaggagaaaatcaaacagcacttgagatt
gaagagcttaatagaaagtatgaacaagcgaagaacatgtcacaggacctggagaagcaa
gctgcccgggtacacgaggaggccaagagggctggagataaagcggtggagatctatgcc
agcgttgcccagctgacgcccgtggactcggaagctctggagaatgaggctaataaaatc
aagaaggaagctgaagatctggaccgtctgattgaccagaaattgaaagattatgaggac
ctcagagaagacatgagggggaaggaacttgaagtcaagaagcttctggagaagggaaag
accgaacagcagactgctgaccagcttctagcccgggcagatgccgccaaggctcttgca
gaagaagctgcaaaaaagggacgaaacaccttacaagaagccaatgacattctcaacaac
ctgaaggacttcgacaggcgagtgaacgataacaagaccgccgcagaggacgctttaagg
agaatccctgccatcaaccagaccataatcgaagccaatgaaaagacgagggaggcgcag
ctggcgctgggcagtgctgccgcggacgccaccgaagccaagagcaaggcccatgaggcg
gagaggatcgccagcgccgtccagaagaacgctaccagcaccaaggcagaggccgaaagg
acttttgcagaagttacagacctggataacgaggtgaacagtatgctgaaacagctacag
gaagcagaacaggaactgaagagaaaacaagaggacgccgaccaggatatgatgatggca
gggatggcttcacaggctgctcaggaagccgagatcaatgccagaaaggccaaaaactcc
gtgaccagcctcctccacctgattaatgaccttctggagcagctggggcagctggacaca
gtagacctgaacaagctcaatgagatcgaaggcaccctgaacaaagccaaagatgaaatg
aaagtcagtgatctcgacaggaaagtgtctgatttggagaatgaagccaggaagcaggag
gccgccatcgtggactataacagagacatcgaggagatcacgaaggacattcgcaacctg
gaagacatcaagaagaccttaccatctggctgcttcaacaccccgtccatcgaaaagccc
tag

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