KEGG   Ailuropoda melanoleuca (giant panda): 100476672
Entry
100476672         CDS       T01329                                 
Symbol
DDX23
Name
(RefSeq) probable ATP-dependent RNA helicase DDX23
  KO
K12858  ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100476672 (DDX23)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:aml03041]
    100476672 (DDX23)
Enzymes [BR:aml01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.4  Acting on acid anhydrides to facilitate cellular and subcellular movement
    3.6.4.13  RNA helicase
     100476672 (DDX23)
Spliceosome [BR:aml03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    100476672 (DDX23)
 Complex C
   U5 SnRNP specific factors
    100476672 (DDX23)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_19
Other DBs
NCBI-GeneID: 100476672
NCBI-ProteinID: XP_002927245
Ensembl: ENSAMEG00000007123
UniProt: D2HWT0
Position
16:complement(39125954..39140231)
AA seq 820 aa
MAGELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSR
SRSRSKSTERDRRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK
DRDSKKDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQRE
VEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREE
KDKSKELHAIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLG
RGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQK
KLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQ
AIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTREL
AQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVL
SRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYR
QTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILE
QGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVA
TDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELK
QAILESPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq 2463 nt   +upstreamnt  +downstreamnt
atggcaggagagctagctgacaaaaaggaccgggatgcatcaccttccaaggaggagagg
aagcgatctcggactcctgacagagagcgagatagagaccgggaccggaagtcttctcca
tctaaagacaggaagcggcatcgctcaagggataggcgtcggggaggcagccgttctcgc
tcgcgttcccgttccaagtctacggaaagagatcgaaggcataaagaacgagaacgggat
aaggagcgtgatcggaataagaaggaccgagaccgggacaaggatgggcacagacgggac
aaggatcgtaagcgatccagcttatctcctggccgaggaaaagattttaaatctcggaaa
gacagggactctaagaaggatgaagaggatgaacatggtgataagaagcctaaggcacag
ccattatccctggaggaacttctggccaagaaaaaggctgaggaagaagctgaggctaag
cccaagttcctctccaaagcagaacgagaggctgaagccctaaagcgacggcagcgggag
gtggaggagcggcagaggatgctcgaagaagagcggaagaaaaggaaacagttccaagac
ttgggcaggaaaatgttggaagaccctcaggaacgggaacgccgggaacgcagggagagg
atggagcgggagaccaatggaaatgaggatgaggaagggcggcagaagatccgggaggag
aaggataagagcaaggaactgcatgccattaaggagcgttacctgggtggcatcaagaag
cggcgccgcacgaggcatctcaatgaccgcaagtttgtctttgagtgggatgcgtccgag
gacacatccatcgactacaaccccctctacaaggaacgacaccaggtgcagttgttgggg
cggggcttcattgcaggcattgacctgaagcagcagaaacgggagcagtcgcgtttctac
ggagacctaatggagaagaggcggacactggaagaaaaggagcaggaggaggccagactc
cgcaagctccgtaagaaggaagccaagcagcgctgggatgatcggcactggtcccagaag
aagttagatgagatgacggacagggactggcggatcttcagagaggattacagcatcacc
accaaaggtggcaagatccccaatcccatccggtcctggaaggactcttctctgccccca
catatcttggaagtcatcgataagtgtggctacaaggaaccgacacccatccagcgtcag
gcaatccccatcgggctacagaatcgtgacatcattggtgtagccgagactggcagcggc
aagacagcagccttcctcatcccattgctggtctggatcaccactctccccaaaattgac
aggatcgaagagtcagaccagggtccttacgccatcattctggcccccactcgtgagttg
gctcagcagattgaggaagagaccatcaagtttgggaagccactgggcatccgcactgtg
gccgtcattggcggcatctccagagaagaccagggcttcaggctgcgcatgggctgtgag
atcgtgatcgctaccccgggacggctgattgatgtgctggagaaccgttaccttgtgctg
agccgctgcacctatgtggttctggatgaggcagatcgcatgattgacatgggctttgag
ccagatgtccagaagatcctggagcacatgcctgtcagcaaccagaagccggacacagat
gaggctgaggaccctgagaagatgttggccaattttgagtcgggaaaacataagtaccgc
caaacagtcatgttcacggccaccatgcccccggcggtggagcgtctggcccggagctat
cttcggcgaccggctgtggtgtacatcggctctgcgggcaagccccacgaacgcgtggaa
cagaaggtcttcctcatgtcagagtcagaaaagaggaaaaagctgctggcaatcttggaa
caaggctttgatccacccattatcattttcgtcaaccagaagaagggctgtgatgttctg
gcgaaatccctggagaagatggggtacaatgcttgcacgctgcacggtgggaaaggccag
gagcagcgagagtttgcactgtccaacctcaaggctggggccaaggacattttggtggct
acagatgtggcgggtcgtggtatcgacatccaagatgtgtctatggttgtcaactatgat
atggccaaaaacatcgaagattacatccaccgcattggccgcacggggcgagctggcaag
agtggtgtggccatcaccttcctcaccaaagaggactccgctgtgttctacgagctgaag
caagccatcctggagagcccggtgtcgtcctgccccccggagctagccaaccacccggat
gcccagcacaagcccggcaccatcctcaccaagaagcgccgggaagagaccatctttgcc
tga

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