KEGG T01329: 100477566

Ailuropoda melanoleuca (giant panda): 100477566

Entry

100477566 CDS T01329

Gene name

RFX5

Definition

regulatory factor X, 5 (influences HLA class II expression)

Orthology

K08061

regulatory factor X 5

Organism

aml Ailuropoda melanoleuca (giant panda)

Pathway

aml04612	Antigen processing and presentation
aml05152	Tuberculosis
aml05340	Primary immunodeficiency

Class

Organismal Systems; Immune system; Antigen processing and presentation [PATH:aml04612]
Human Diseases; Immune diseases; Primary immunodeficiency [PATH:aml05340]
Human Diseases; Infectious diseases; Tuberculosis [PATH:aml05152]

SSDB

Motif

Pfam:

RFX5_DNA_bdg RFX_DNA_binding Pox_D5

Other DBs

NCBI-GI:

301767898

NCBI-GeneID:

100477566

UniProt:

D2HBR9

Position

AA seq 618 aa
MAEDEPDTKSPKTGGRAPSGSAEAGEPTTLLQRLRGTISKAMQNKVEGILQDVQKFSDND
KLYLYLQLPSGPSTGDKSSEPSTLSNEEYMYACRWIRNHLEEHTDTCLPKQSVYDAYRKY
CESLACCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYSGIRRKTLVSMPPLPGLDL
KGSDSPEMGPEVTPAPRDELVEAACALTCDWAERILKRSFSSIVEVARFLLQQHLISARS
AHAHVLKAMGLADDERGPRERSSKSKNGVESLEGGVHKKPERPAQPPKELEPRAGAGPPA
RGERKKSVVESPAPAANNPQVNALVARLPLLLPRAPRSLIPPIRVSPPILAPKLSSGLKV
ATLPLPSRAGGPQAAVPIINMILPTVPALPGPGPGPGPGPGQALPGALTQPQGTENREVG
IGGDPGPHDKGVKRTAEVPVSEAIGQDPPAKTAKQDIEDTGSDAKRKRGRPRKKSGGSKE
RNSPPDKSAVAMDSAQSPRLPRETWASGGESNSAGGSERPGPVGEAEKGMVLAQGQEDGA
VSRGGRGPSSRHAKEAEDKIPLVTSKVSVIKGSRSQKEALHLVKGEVDTGAQGNKDLKGH
VLQNSLLHEGKDPKATPP

NT seq 1857 nt +upstreamnt +downstreamnt
atggcagaagatgaaccggatactaagagcccgaagactgggggaagggccccctcaggt
agtgctgaggcgggagaacccaccacccttcttcagaggctccgaggtaccatttccaag
gccatgcagaacaaagtcgagggaatcctgcaagatgtacagaaattctcagacaacgac
aagctgtatctctaccttcagctcccctcagggcccagtactggagacaaaagctcagag
ccaagcacactcagcaacgaggagtacatgtatgcctgcaggtggatccgcaaccaccta
gaagagcatactgacacctgtttgccgaagcaaagtgtttacgatgcctatcggaagtat
tgtgagagcctcgcctgttgccgcccactcagcacagccaacttcggcaaaatcatcaga
gagatcttccctgacatcaaggcccgaaggcttggtggtcggggccagtccaaatattgc
tacagtggcatacgaaggaagaccttggtatctatgccacccttgcctggacttgacctg
aagggctctgacagtccagaaatgggcccagaagtaaccccagcacctcgggatgagttg
gtggaggcagcctgtgctctgacctgtgactgggcagaacgaatcctgaaacggtccttc
agttccattgttgaggtcgcccgcttcctgctacagcagcatctcatctctgctcgatcg
gcccatgcccacgtgctcaaggcgatggggcttgctgacgatgaacgtggccctcgggag
cggtcatctaaatccaagaatggtgtagagagcctagaaggtggagtccataagaaacca
gagagaccagcccagcctcctaaggagctggaaccccgggctggggctggcccccctgca
cgtggcgagcggaagaaaagtgtagtggagagcccagccccagcagccaataacccacag
gttaatgccctggtggcccggctgcctctgctccttccccgggcccctcgctcacttatt
ccaccaatccgagtctctccacccatcctggcccccaagctttcttcaggcctgaaagtg
gctacactgcctctgcccagtagggctgggggaccccaggcagctgtgcccatcattaac
atgatcttaccaaccgttcctgctttgcctggacctggacccggacccggacccgggcct
gggcaagccctgcctggggcactcactcagccgcaaggcacagagaacagggaagtaggc
ataggtggtgacccgggaccccatgacaagggtgtcaagaggacagctgaagtacctgtg
agtgaggccattgggcaggatccacctgctaaaacagcaaaacaggatatagaggataca
ggaagtgatgccaaaagaaaacgggggcgccctcgaaaaaaatcgggtggaagtaaggaa
aggaactctccccctgacaagtcagcagttgccatggactctgcccagtccccaaggtta
ccacgggagacatgggcctctggaggggaaagcaactcagctggagggtccgagaggcca
gggccagtgggagaggctgagaaggggatggtgcttgcccagggtcaggaagatggtgct
gtttccaggggaggaaggggccccagttcccggcatgccaaagaagcagaagataaaatt
cctctggtcacctcaaaagtgagtgtcatcaagggcagtagaagccaaaaggaagctctt
catttggtaaagggagaggtagacaccggagcacagggtaataaagacttaaaggggcac
gtgcttcaaaattccttactccatgaggggaaagaccccaaagcaacacccccgtga

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (14)   

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